Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01137 ATGAGGTGCAAAGCAGCAGATTTGGCAAAAGCAAAGCATAGAAAGGGCCTATGGTCCCCTGAAGAGGACAGTAAGCTCAGAAACTATATCCTTATGCATGGACATGGTTGCTGGAGCTCTGTTTCCATTAAAGCAGGATTGCAGAGGAATGGAAAGAGCTGCAGACTGAGGTGGATTAACTACCTGAGGCCAGGATTAAAGAGAGGAATGTTCAGCAAACAAGAGGAAGAGACAATTCTGACCCTTCACCATTTGTTAGGCAACAAGTGGTCTCAGATAGCACAGCATTTGCCAGGAAGGACAGACAATGAGATCAAGAACTACTGGCACtcatatttgaaaaagaaagtggcCAAAGCTGAGGAAACTGAATTATCTCATAAACAGAATCACAATACTAGCTCAAGTTCAGATAAAATGAATTCTTCAAACTCTTCTCTGGAAAATTCAGCAACAAACATTGATCACTCATCTCTGCAGAATTACAACTTCAACAAAGAGGCTTGTCCAAGCTCCTTACCCAAACTGTTATTTGCTGAGTGGCTTTCACTAGATTATGTACAAGGTGGGAGCTCTGCATATTCAGATGACTCTATGGCCTTGAAGAATGGATTTGATCAGAGTTCAAATTCCCAGGAATCTGTAATGCATGGAATGACAGACAGAATCTACGGCGCCGAGTTTCATGATCATAGCAGCACTCTAACTCACAATTCAGCAGCTCAGATGTTCAGTTCAGAACTTAagttttcaaatcaaatggTAAATGGGTTCATCCATTGTGTCCCTGGGGATAATTTGAATAGCAACTTCAGCTTGAACAATGATGTAATGTACATATG 842 0.3979 MRCKAADLAKAKHRKGLWSPEEDSKLRNYILMHGHGCWSSVSIKAGLQRNGKSCRLRWINYLRPGLKRGMFSKQEEETILTLHHLLGNKWSQIAQHLPGRTDNEIKNYWHSYLKKKVAKAEETELSHKQNHNTSSSSDKMNSSNSSLENSATNIDHSSLQNYNFNKEACPSSLPKLLFAEWLSLDYVQGGSSAYSDDSMALKNGFDQSSNSQESVMHGMTDRIYGAEFHDHSSTLTHNSAAQMFSSELKFSNQMVNGFIHCVPGDNLNSNFSLNNDVMYI 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01137 280 CDD SANT 71 113 IPR001005 -
Bva04g01137 280 CDD SANT 18 62 IPR001005 -
Bva04g01137 280 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Bva04g01137 280 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Bva04g01137 280 PANTHER MYB DOMAIN PROTEIN 55 1 274 - -
Bva04g01137 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bva04g01137 280 MobiDBLite consensus disorder prediction 120 151 - -
Bva04g01137 280 MobiDBLite consensus disorder prediction 129 151 - -
Bva04g01137 280 SUPERFAMILY Homeodomain-like 13 109 IPR009057 -
Bva04g01137 280 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bva04g01137 280 PANTHER MYB TRANSCRIPTION FACTOR 1 274 - -
Bva04g01137 280 SMART sant 14 64 IPR001005 -
Bva04g01137 280 SMART sant 67 115 IPR001005 -
Bva04g01137 280 Gene3D - 15 67 - -
Bva04g01137 280 Gene3D - 70 145 - -
Bva04g01137 280 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Bva04g01137 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01137 Bva-Chr4 7649515 7651412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01137 3 196 MYB Transcription Factor Family AT5G52260 53.052 6.31e-66 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva04g01137 Myb_DNA-binding 5.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01137 K09422 - gmx:778167 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01137 04 7649515 7651412 Bva04g01137 04 7649515 7651412 ECH