Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01111 ATGGCACATTCTCGGGTGGCTGGAGGGTTAAGCCAATCATCATCAAGTTCTGGAATATTCTTCCAAGGAGATGGACAATCACAGAATCTTGTTAACTCTCACTTAAGCTCGTCTTTTGGTAACTCATCTAACTCTATTCCTGGAACTGGGCGCTCAAATCTGGGTCCGGTCTCTGGGGACTTGAACAATGCAGTCTTAAACAGTGTGGCAAACTCAGGACCAAGTGCTGGAGCGAGTTCTTTAGTCACAGATGCAAACTCTGCACTTTCAGGAGGCCCTCATTTGCAGAGAAGTGCAAGCATTAATACAGACTCATACATGCGCCTGCCAGCATCACCCATGTCATTCTCatcaaataatattagtaTTTCAGGGTCATCAGTGATGGATGGTTCTTCTGTAGTTCAACAAAGCTCTCATCAAGATCAGAATATTCAACAGTTGCGGCAGAATCAGCACCAACCACAGGGTGCTTCAACTGCTACATCTTTACCAGCATCACAAACTGGCCCAGCTCCACTTCCAGTTGGTGCACGAGCGCCTGCATCTTTCATCCAGGATCCTAATAACATATCCCAGTTGCAGAAGAAACCTCGGCTGGAAATCAAGCAGGAAGATATGCTGCAACAGCAGGTATTACAACAGCTTCTTCAGAGGCAAGATCCAATGCAGTTCCAGGGTCGTAATCCACAATTACAGGCCTTGCTTCAGCAGCAGAGAATGAGGCAACAGCAGCAAATTCTTCAATCAATGCCGCAGTTACAGCGAGCCCACTTgcagcagcaacaacaacagcagcaaATGCAATTAAGGCAACAATTACAGCAACAATCAATGCAGCCCACATCTTCCATTAAGCGTCCATACGAGAGTGGGGGTGTATGTGCCCGGCGGTTGATGCAATATCTATATCATCAAAGGCAGCGACCAGCTGATAACAGTATTGCGTATTGGAGAAAATTTGTGGCTGAATATTACTCTCCTCGTGCAAAGAAACGATGGTGTTTGTCATTATATGATAATGTGGGGCATCATGCTCTTGGTGTTTTTCCCCAAGCAGCTATGgATGCATGGCAGTGCGACATATGTGGTTCTAAATCAGGAAGGGGATTtgAGGCAACTTTTGAAGTACTCCCCAGACtcaatgaaatcaaatttggCAGTGGAGTGATCGATGAACTTATGTTTCTCGAATTGCCACATGAAATTAGATTTCCTTCTGGAGTAATGTTGTTAGAATATGCAAAAGCAGTTCAAGAAAGTGTCTATGAACAACTTCGTGTTGTTCGTGAGGGAAAACTTCGAATCATCTTCACACAAGACCTTAAGATATTATCTTGGGAATTTTGTGCAAGACGCCATGAAGAACTTCTACCTCGACGGTTGGTTGCACCACAGGTCAACCAATTGGTTCAGGTAGCGCAGAAGTGCCAGAGTACTATTGCTGAAAGTGGATCTGATGGGATTTCTCAGCAGGACCTGCAGACAAATAGCAATATGGTATTGACAGCTGGGCGTCAGCTTGCAAAAAGTTTGGAGTTACAGTCTCTAAATGACCTAGGTTTCTCTAAAAGATATGTGAGATGCTTGCAGATCTCTGAGGTTGTCAATAGCATGAAAGATCTGATAGATTTCTGCCGGGAGCACAAAGTTGGGGCAATTGAGGGCTTGAAAAATTATCCTCGACATGCAACTGCAGCCAAGCTCCAAATGCAAAAACTGCAGGAGATGGAACAGCTAGCAAACGTTCAAGGTCTACCAACTGATAGGAATACATTGAACAAGCTGATGGCATTGCATCCTGGATTGAATCAACAAATTAACAGTAATCATAATATGGTCAATCGTGGCGCTTTAAGTGGATCAGCACAAGCTGCTTTGGCACTGACTAATTACCAGAGTCTTCTTATGAGGCAAAACTCCATGAATTCAAATCCCAACTCACTTCAACGAGAAGCTTCATCTTCCTTCAATAGTCCCAATCATTCTCAATCTTCATCCTTGCCAGGGGCTGCTGCTTTGATTCCAGGGTCCCTACAGAATTTACCTGCGTCTGGTTTCTCAAGTCCCCATCTACCGCCACAACAGCAACTTCAGCAGCGATCGTTGGGTGCTAATGGCTTACTGCAACAAAACCACTCTCAGAGCTCCCAACAAAACCATCTTCAACAGCAGATGCTCCAGCAAATGCTGCAGGAGATGTCAAATAGCAGTGGTGGGGTGCAACCCCAAGCCGTTGCTGGAAATGGAAGTGTGGGAACAAATGGGTTGGGTTTTGGCGGAAACACGCCGCCAATAACCGGAGGTTCTACTGCCAATGTTTCAGGAAGTAATGGACCTGTTCCTAGCAGGAGTAACAGTTTCAAAGCTGCTTCAAACAGTGATTCTTCTGCTGCTGGTGGCAACAATGGATTCAACCAGAGAACATCTGAGGTGCCCCAAAATTTCCGTTTGCAGGAAGATGTGGTTCAGGATATTGCCCATGATTTCACAGATAATGGTTTCTTTAGCAGTGATCTGGATGATAACATGGGTTATGGCTGGAAGGCATG 2552 0.4416 MAHSRVAGGLSQSSSSSGIFFQGDGQSQNLVNSHLSSSFGNSSNSIPGTGRSNLGPVSGDLNNAVLNSVANSGPSAGASSLVTDANSALSGGPHLQRSASINTDSYMRLPASPMSFSSNNISISGSSVMDGSSVVQQSSHQDQNIQQLRQNQHQPQGASTATSLPASQTGPAPLPVGARAPASFIQDPNNISQLQKKPRLEIKQEDMLQQQVLQQLLQRQDPMQFQGRNPQLQALLQQQRMRQQQQILQSMPQLQRAHLQQQQQQQQMQLRQQLQQQSMQPTSSIKRPYESGGVCARRLMQYLYHQRQRPADNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLELPHEIRFPSGVMLLEYAKAVQESVYEQLRVVREGKLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAESGSDGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDFCREHKVGAIEGLKNYPRHATAAKLQMQKLQEMEQLANVQGLPTDRNTLNKLMALHPGLNQQINSNHNMVNRGALSGSAQAALALTNYQSLLMRQNSMNSNPNSLQREASSSFNSPNHSQSSSLPGAAALIPGSLQNLPASGFSSPHLPPQQQLQQRSLGANGLLQQNHSQSSQQNHLQQQMLQQMLQEMSNSSGGVQPQAVAGNGSVGTNGLGFGGNTPPITGGSTANVSGSNGPVPSRSNSFKAASNSDSSAAGGNNGFNQRTSEVPQNFRLQEDVVQDIAHDFTDNGFFSSDLDDNMGYGWKA 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01111 850 MobiDBLite consensus disorder prediction 127 189 - -
Bva04g01111 850 MobiDBLite consensus disorder prediction 7 57 - -
Bva04g01111 850 Pfam LIM-domain binding protein 298 557 IPR029005 -
Bva04g01111 850 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 181 849 - -
Bva04g01111 850 MobiDBLite consensus disorder prediction 681 698 - -
Bva04g01111 850 MobiDBLite consensus disorder prediction 1 57 - -
Bva04g01111 850 Coils Coil 256 280 - -
Bva04g01111 850 PANTHER LIM DOMAIN-BINDING PROTEIN 5 149 IPR029005 -
Bva04g01111 850 MobiDBLite consensus disorder prediction 640 671 - -
Bva04g01111 850 MobiDBLite consensus disorder prediction 640 698 - -
Bva04g01111 850 PANTHER LIM DOMAIN-BINDING PROTEIN 181 849 IPR029005 -
Bva04g01111 850 MobiDBLite consensus disorder prediction 732 814 - -
Bva04g01111 850 MobiDBLite consensus disorder prediction 127 169 - -
Bva04g01111 850 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 5 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01111 Bva-Chr4 7479254 7486792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01111 287 564 C2H2 Transcription Factor Family AT1G43850 58.273 2.62e-108 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01111 - - pper:18787712 1171.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01448 03 13748185 13755189 Bva04g01111 04 7479254 7486792 ECH
Bva04g01111 04 7479254 7486792 Bva04g01111 04 7479254 7486792 ECH