Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01099 ATGGCTGTTGCCAAGAGCAACAGCACCGGTGAACCttcaacttcatccatttgtTACAAGGTAGAAAACTTGACTGGAACCATATTGGACACAACTCAGACCTTGAATTTGAAAGATCGATACATCCTCGGTGAACAATTGGGTTGGGGACAGTTTGGTATTATTAGAGCATGCTCTGACAAGTTGACTGGAGAGGTCTTGGCCTGTAAATCTATTGCTAAAGATAGATTGGTTACTTCAGATGATCTGCGGAGTCTCAAACTGGAGATTGAGATAATGGCTAGATTATCTGGGCACCCAAATGTTGTAGACCTCAAGGCAGTTTATGAGGAGGAAAATTTTGTTCATCTGGTGATGGAGCTTTGTGCTGGCGGAGAGCTATTtcaccaattggagaagtatGGGCGATTTTCTGAATCTGAGGCCAGGGTTCTTTTTAGGCATCTCATGCAGGTGGTTTTGTATTGTCATGAAAATGGGATTGTTCATAGAGATTTGAAGCCTGAGAATATTCTCCTAGCAACAAGAGCCTCCTCATCTCCAATTAAATTGGCAGATTTTGGGCTTGCAACCTACATCAAGCCTgGACAGAGTTTGCATGGGTTAGTCGGGAGTCCATTTTATATAGCTCCAGAGGTACTTGCTGGTGCATATAACCAGGCTGCTGATGTTTGGAGTGCTGGCGTTATTCTTTACATTCTACTGAGTGCAATGCCTCCATTTTGGGGGAAGACCAAGTCACAGATATTTGAGGCTGTTAAGGCAGCTGACCTGAGGTTTCCATCTGAACTCTGGGGTCACATTTCGGAATCAGCTAAAGATCTAATTAAGGGAATGCTTTGCACAGATCCGTCTCAAAGGCTCACTGCTCAGCAGATCTTAGATCATAGCTGGATGGACAGCAGTCAAACAGATCAAGAACAACTAAGTGAACATGAAATCCAAAGTGGTGGAGAATGGGATATTGGTGGCAACTCATTCTCTGCCTCCTTTATGTCCCGGCACAGGGACATCAGCTTTGGAGCTGGGTCACCTGTTTGTGATGCTCAATCTCCTACATTCACTTGcaaatcatcattttcttcctttttggtAGAACCATCAACTCCATGTTCAGCTTCTGGAGGGTTTTCATTTCAGAGCTTGGGCAATTCCCCGGGTTTGGACTTCTTGTCACCTGTTCCATCACTGCCTAGCTTTGCATTTCTCAGCCCCAGTTCTGTTGTCGAGCAAAGGAGTTGTTCCTTAGAGTTTGCAACTAACACATCAAATACTGAAAAAGCAAGCTTGGGAAAGTTGCTTCTATTGCCAGACTCTCCTCTTTGTTTCGGGCATGCTGTTAAAGGAACAGACGGCAAGCCTGCAGAGACTAAAAGAGCAAGTGGAACAAATGGGCATAGGTCATTGGGAATCCACAACAAGAGAAACCGAACAATTGGACACGGTGAGCTTGAGCAACTCGATCTTGTGGTGACTGAATCGGTTATCAGGTGGTCATCGTGCACACACCTTCCGACATCACTTAGATCATCACTTGTCTGTTG 1544 0.4326 MAVAKSNSTGEPSTSSICYKVENLTGTILDTTQTLNLKDRYILGEQLGWGQFGIIRACSDKLTGEVLACKSIAKDRLVTSDDLRSLKLEIEIMARLSGHPNVVDLKAVYEEENFVHLVMELCAGGELFHQLEKYGRFSESEARVLFRHLMQVVLYCHENGIVHRDLKPENILLATRASSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGAYNQAADVWSAGVILYILLSAMPPFWGKTKSQIFEAVKAADLRFPSELWGHISESAKDLIKGMLCTDPSQRLTAQQILDHSWMDSSQTDQEQLSEHEIQSGGEWDIGGNSFSASFMSRHRDISFGAGSPVCDAQSPTFTCKSSFSSFLVEPSTPCSASGGFSFQSLGNSPGLDFLSPVPSLPSFAFLSPSSVVEQRSCSLEFATNTSNTEKASLGKLLLLPDSPLCFGHAVKGTDGKPAETKRASGTNGHRSLGIHNKRNRTIGHGELEQLDLVVTESVIRWSSCTHLPTSLRSSLVC 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01099 514 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Bva04g01099 514 CDD STKc_CAMK 40 298 - -
Bva04g01099 514 SMART serkin_6 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01099 514 Gene3D Transferase(Phosphotransferase) domain 1 128 320 - -
Bva04g01099 514 ProSiteProfiles Protein kinase domain profile. 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01099 514 SUPERFAMILY Protein kinase-like (PK-like) 38 365 IPR011009 -
Bva04g01099 514 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Bva04g01099 514 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 34-LIKE 6 507 - -
Bva04g01099 514 MobiDBLite consensus disorder prediction 452 472 - -
Bva04g01099 514 Pfam Protein kinase domain 43 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01099 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Bva04g01099 514 PANTHER SERINE/THREONINE-PROTEIN KINASE 6 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01099 Bva-Chr4 7319018 7322807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01099 28 304 EF-hand Containing Proteins AT3G57530 46.931 3.84e-94 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva04g01099 Pkinase 1.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01099 - - gmx:100776088 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01461 03 13872109 13876012 Bva04g01099 04 7319018 7322807 ECH
Bva04g01099 04 7319018 7322807 Bva04g01099 04 7319018 7322807 ECH