Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01097 ATGGGTAAAGGGGGAATGTCAACTGAAGGTCATGGAGAAGGCAAGGATGGCGAAACAGACAACATGGCTGCTTGGCTTGTTGGTCTAAACTCCCTCAAGATTCTACCTTTCAAGCTTCCTCCTCTGGGACCCCACGATGTCAGAGTTAGGATGAAAGCTGTTGGTATATGTGGCAGTGATGTTCATTACCTAAAGACGCTGAGATGTGCAGATTTTGTAGTTAAAGAGCCAATGGTCATTGGTCATGAGTGTGCTGGGATCATAGAGGAAGTTGGTATTGAGGTTAAGCATCTGCTGCCTGGGGACCGTGTGGCAATTGAACCCGGCATCAGTTGCTGGCGTTGTGACCCCTGCAAAGAGGGTCGATATAACTTGTGCCCTGATATGAAGTTTTTTGCAACTCCACCTGTTCATGGTTCCCTTGCTAATCAGaTAGTGCATCCCGCAGATCTCTGTTTTAAACTCCCAGATAATGTGAGCTTGGAGGAGGGGGCAATGTGCGAGCCCTTAAGTGTTGGTGTTCATGCATGTCGTCGAGCTGATATTGGTCCAGAGAAAAATGTGTTGATCATGGGAGCAGGACCCATAGGACTTGTCACATTGCTTGCAGCCCGTGCTTTTGGAGCACCAAGGATTGTCATTGTAGATGTGGATGAACATCGTTTATCTGTTGCAAAAACTCTTGGTGCAGATGAgatttttaaagtttcaacAAACATTCAGGATGTAGCTGAAGAAGTTTTGAAGATACACAAGGCTATGGGAGCTGGTGTGGATGTGACCTTTGACTGTGCAGGTTTTAACAAAACCATGTCAACAGCTTTGAGTGCTACTCGTTCAGGTGGCAAAGTTTGCCTGGTGGGAATGGGTCACAGCGAAATGACTCTTCCCCTCGCGCCAACCGCTGCAAGGGAAGTTGATGTGATTGGCATTTTCCGGTATAAAAACACATGGCCTCTTTGCCTCGAATTTCTTAAGAGTGGGAAGATAGATGTGAAACCCCTTATAACTCACAGGTTTGGGTTCTCTCAGAAGGAGGTGGAAGAAGCATTTGAAACTAGTGCTCGTGGTGGCAATGCGATTAAAGTCATGTTCAATCTTTA 1103 0.4578 MGKGGMSTEGHGEGKDGETDNMAAWLVGLNSLKILPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGIIEEVGIEVKHLLPGDRVAIEPGISCWRCDPCKEGRYNLCPDMKFFATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRADIGPEKNVLIMGAGPIGLVTLLAARAFGAPRIVIVDVDEHRLSVAKTLGADEIFKVSTNIQDVAEEVLKIHKAMGAGVDVTFDCAGFNKTMSTALSATRSGGKVCLVGMGHSEMTLPLAPTAAREVDVIGIFRYKNTWPLCLEFLKSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01097 367 PANTHER SORBITOL DEHYDROGENASE 15 367 - -
Bva04g01097 367 Pfam Alcohol dehydrogenase GroES-like domain 44 155 IPR013154 -
Bva04g01097 367 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 81 95 IPR002328 GO:0008270|GO:0016491
Bva04g01097 367 PANTHER L-IDONATE 5-DEHYDROGENASE 15 367 - -
Bva04g01097 367 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 331 IPR036291 -
Bva04g01097 367 Pfam Zinc-binding dehydrogenase 195 325 IPR013149 -
Bva04g01097 367 CDD sorbitol_DH 23 366 IPR045306 GO:0016616
Bva04g01097 367 Gene3D - 172 312 - -
Bva04g01097 367 SMART PKS_ER_names_mod 28 365 IPR020843 GO:0016491
Bva04g01097 367 SUPERFAMILY GroES-like 21 193 IPR011032 -
Bva04g01097 367 Gene3D - 32 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01097 Bva-Chr4 7299880 7304832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01097 32 300 Monolignol Biosynthesis Gene Families AT4G37980 27.698 4.00e-19 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01097 K00008 - mnt:21388822 671.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01097 04 7299880 7304832 Bva04g01097 04 7299880 7304832 ECH