Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01077 ATGGATTCAACTCTTATCGAGGAAGATGATACTGAAACAGAGTCGATGAGTCTAGATGACATCAAGCATGGAAGATTAGAATTGACTCAGCCACCAGAGGCTGGCATATGGAACGGGGCGACAAGAATTGAACTAATGTATAGTAAGCTCTCTGAGTTACCACTGTCTCCAAATTGCCCTCTGCTTAGAGTGCTATTGTTACAGGGCAATGCTGAGTTAATGGAAATTCCGCCCTTATTTTTCAACTACACGCCTTTGCTTCGGGCCTTGGACCTATCTTACACTAGCATAACTCATTTGCCAAGCTCCTTTTTTGGTTTGGTGGAGCTTGGAATACTGTATTTAAGAGGTTGTGAGCTTTTCATGGAAATACCGTCCGAAATTGGTCAACTCAAGAAGCTTGAGGAGCTTGATCTTAATGGAACTCAAATTTCACATGTGCCCATAGAGATCCAAGAGTTGATCAATCTGCAAAAGTTGTGCCTCTCCTTTTATGAATATGACCAAAATATTGGTCAAGTTATTCCAAAGGGAATGATATCAAAACTGACTCGATTGAGTTATTTAAGCATTGATGTGAACCCTGATCATAGCAAGTGGGATGTGACTGTGCAATTTGTTTTACAAGAAATCtctgaattatttttactgaGAACTCTGATTCTATATGTCCCGCGAGTTGAGCTTTTGAAGCTTATACCAGAAAACAAATACTTGGATTTTAGATTGGTTGCTGGTCATCATATGCAACGGATCATATCACGTGTACCGCCCACggttgaagaaaaattcaaacaaagaaatctCAGCTTAAGATTAGTATATGGGAATGATGAGAATGGTGTGAATATGTTGCCAGAAATTAATAGGGTTCTTAGAGGCACCAACGCTTTTTTCTTGGATAGACATATGACAATCAAGCATCTCTCTGAATTTGGATTGATGAATCTAAACCAGCTGCAAGTGTGCATTCTGGCAGAATGTAATGAGATGCAGACAATTGTTGAGAAAGGGCACTCACACGTCTATGCAGACAATCTTGCATGTTTGCAAGTCTTGAGTGTATTCTACATGAAGAATCTAAGAAGCATTTGGGAAGGTAGTACTCCTTCTAGTCTCTTTTTGGGTCAACTTAAGTCTTTGACATTACACACTTGTCCTAATTTAACAACCATCTTCACTTTGGATTTCATTGACTGTCTTGTCAACTTGAAGGAGCTTATAGTTCAAGATTGCCCCAAAGTAACTACTTTAGTAACTCATAAGTCATCAGCATTTGGTCTAAAATCTTATCTCCCTAAGATAAGAAAGATATCACTTCTCTACCTCCCTGAATTTGTCAGCATTTCCAGTGGATTGCGAGTTGGaccaaatttagaaaaattaggattttattATTGCCCAAAACTCCAACATCTTTCTACTAGAGAATTGTGCAGCGAAAAACTGAAGGTTATCAAAGGAGAAACCAAGTGGTGGGCAGCACTAAGATGGAAAAAGGCAATGAGGGGACAAAATAATCTGAAAGGCTTATTTTCCCCTATTGATGAAGACGTTGACATAATGACTCAGTTAATTGCAGACGTTGATGAATCCTCTAGCTCCAAGAATATAGAGATCCATGATGAGTTTGGAGACTGGGGACTAATGAATCTTGCAAATGAGCTAGTACAAGGGAAAGAGCTGGTAAGACAGCTCCAATTCTGTCTCAGTGAGCCTTCTCCATCTAGAGGAACTTTTAAGGTCTTATTCCCTAAGATCACAGCCTCATTTGAAAAGGCATCACAGCCCACAGGTATTTCCATCAATGAAGACTCTGACAGAAAGAGGGAGGACTTGGAATTATTCTACCAGATGAGGATTTTAAAATCCCTGCTGGCGGAGAGTCGAGCGTTGCAATTAAGGTTCACCAAGAATCTTCCACCATCTATATTCACTAACAGCAATGTAAAAAACATTGATGGGAACCCTATTACGGTCGTTCTTGTTGACAAGATTGATCCAACGGTTCTCTTGAGTCTCCCTGACCCAATCAAGCTGGAAATTGTGGTTCTTTATGGAGATTTTCCATTTCAGGATAATGAGGACTGGACTAGTAAGGAATTCAGTAGCCACATAGTGAAGGAGAGAACGGGTAGGCTGCCATTGCTTACAGGAGAGTTGAATGTCACCATGACGAATGGAATTGCAGCAATTGAGGACATTAAATTTACTGACAATTCTAGTTGGACTAGGAGCATGAAATTTAGGATTGCTGTGAGAGTGGATATTCGAGATGTGCGAATTCGTGAAGGCATAACTGAAGCATTTGTTGTTATGGATTCACATGGAGACGGTGGAAGTTGTCTCAGTTATAACAGCCACATAGGGAAGGAAAAAGATGGCCTCggaaaaataaagtatgaaGACAACGAGTGGATGCGCAAGGAAACAGAAAAGCAAAGATGGCGAGTAATGGTCAGACTTTGTGCCTCCCTCGGATCTCTATTGCCTCTTGAGCATAGAAAGGGAAAGTGCTCAGTTTCTGATCACTTGAATGGGGCtaccaattatatattacacCTACAGAATAAGCTGAATCAGTTGCAAGCCAAGAGAGATGAGTTAATAAAGTTATCTAACTTGAGTTTTGTCAGCTCTGGAGAAAACTCAACTACCCATCTTCCTACCGGTGTCGTTGTTCACTTTTCTTTGGATGGCATCGAGATAATATGCACTAACAATTTGAAGCAGCATGCGTTTCGTCTATCAAGTTTACTTAATATAGTGCAAAGAGAAGGTCTTAATGTGGTTAGCTGTATTTCCACCAAAGCAAATGAGCAAATGTTGCATACTATCCGATCAGAGGTTTCAGATATGACTCAGATTGACTCCTCCGAACTGCAAAGAAAGCTTAATGAAGAGGTTTTCCTGCGACGTTA 2921 0.3923 MDSTLIEEDDTETESMSLDDIKHGRLELTQPPEAGIWNGATRIELMYSKLSELPLSPNCPLLRVLLLQGNAELMEIPPLFFNYTPLLRALDLSYTSITHLPSSFFGLVELGILYLRGCELFMEIPSEIGQLKKLEELDLNGTQISHVPIEIQELINLQKLCLSFYEYDQNIGQVIPKGMISKLTRLSYLSIDVNPDHSKWDVTVQFVLQEISELFLLRTLILYVPRVELLKLIPENKYLDFRLVAGHHMQRIISRVPPTVEEKFKQRNLSLRLVYGNDENGVNMLPEINRVLRGTNAFFLDRHMTIKHLSEFGLMNLNQLQVCILAECNEMQTIVEKGHSHVYADNLACLQVLSVFYMKNLRSIWEGSTPSSLFLGQLKSLTLHTCPNLTTIFTLDFIDCLVNLKELIVQDCPKVTTLVTHKSSAFGLKSYLPKIRKISLLYLPEFVSISSGLRVGPNLEKLGFYYCPKLQHLSTRELCSEKLKVIKGETKWWAALRWKKAMRGQNNLKGLFSPIDEDVDIMTQLIADVDESSSSKNIEIHDEFGDWGLMNLANELVQGKELVRQLQFCLSEPSPSRGTFKVLFPKITASFEKASQPTGISINEDSDRKREDLELFYQMRILKSLLAESRALQLRFTKNLPPSIFTNSNVKNIDGNPITVVLVDKIDPTVLLSLPDPIKLEIVVLYGDFPFQDNEDWTSKEFSSHIVKERTGRLPLLTGELNVTMTNGIAAIEDIKFTDNSSWTRSMKFRIAVRVDIRDVRIREGITEAFVVMDSHGDGGSCLSYNSHIGKEKDGLGKIKYEDNEWMRKETEKQRWRVMVRLCASLGSLLPLEHRKGKCSVSDHLNGATNYILHLQNKLNQLQAKRDELIKLSNLSFVSSGENSTTHLPTGVVVHFSLDGIEIICTNNLKQHAFRLSSLLNIVQREGLNVVSCISTKANEQMLHTIRSEVSDMTQIDSSELQRKLNEEVFLRR 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01077 973 Pfam Calmodulin binding protein-like N-terminal domain 632 774 IPR046831 -
Bva04g01077 973 Gene3D Ribonuclease Inhibitor 21 257 IPR032675 -
Bva04g01077 973 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 803 855 IPR011598 GO:0046983
Bva04g01077 973 Pfam Helix-loop-helix DNA-binding domain 808 856 IPR011598 GO:0046983
Bva04g01077 973 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 803 870 IPR036638 GO:0046983
Bva04g01077 973 Gene3D Ribonuclease Inhibitor 258 491 IPR032675 -
Bva04g01077 973 Gene3D - 800 877 IPR036638 GO:0046983
Bva04g01077 973 SUPERFAMILY L domain-like 29 474 - -
Bva04g01077 973 PANTHER - 43 507 - -
Bva04g01077 973 Coils Coil 845 875 - -
Bva04g01077 973 Pfam Leucine rich repeat 61 120 IPR001611 GO:0005515
Bva04g01077 973 PANTHER PROTEIN LAP1-LIKE 43 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01077 Bva-Chr4 7123245 7130691 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01077 628 778 Calmodulin-binding Proteins AT5G57580 47.742 3.79e-34 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva04g01077 Calmodulin_bind 1.1e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01077 - - aprc:113857376 513.072