Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01076 ATGAATCCTTCATACCACAGTGATGAGTTAATCTTTCAGATTCGGTCACCTAACGCTTGTCTCCTCCCAATCCAAAAAATCCCAGAAGATCAAATCTTGCATGATTCTCCTACTAATGGCAGTTGTCTTGGTTATAACAGCCATAAAGGGAAGGGAAAGATGAGAAAGCAATTACCTGCTCGTGAAAAAGAAGACATCGGAAAAATAGAGGATGAAAACAAGAAGTGGATGCGCAAGGAAACAGAAAAACTAAGAAGGCAAGAAATGGCCACACTTTGTGCCTCCCTCAGATCTCTATTGCCTCTTGAGTATATAAAGGGAAAGCGCTCAACTTCTGATCACTTGTATGAGACTCTGAATTATATCAAGCACCTAAAGAATAAGGTGAAGCAATTGGAAGATAAGAGAGATGAGTTAATGAAGTTATCTAACTTGAGTTTTGTCAACTCGGGAAATGAAAACTCTACTACCCATCTTCCTACCTGTGTTATAGTACTCCCTTGTTTGGATGGCGTCCAGATAATGTGCAGTTATAGCTTGAAGCAGCATGCGTTTCCTCTATCAAGTTTACTTGATATACTGCGAAGAGAAGGGCTTAATGTGGTTAGCTGTACTTCCACCAAATCAAATGATCATCAAAGGCTCATACACATTATCCAATCAGAGatTTCAGATATGGCTCGGACTGACTTCTCTGAACTGCGAAGAAAGATTAGTGAAGGAATATCGTCTTCAAGTAgtattctaataaaattttgtgtgcTTGCCAACTG 773 0.3868 MNPSYHSDELIFQIRSPNACLLPIQKIPEDQILHDSPTNGSCLGYNSHKGKGKMRKQLPAREKEDIGKIEDENKKWMRKETEKLRRQEMATLCASLRSLLPLEYIKGKRSTSDHLYETLNYIKHLKNKVKQLEDKRDELMKLSNLSFVNSGNENSTTHLPTCVIVLPCLDGVQIMCSYSLKQHAFPLSSLLDILRREGLNVVSCTSTKSNDHQRLIHIIQSEISDMARTDFSELRRKISEGISSSSSILIKFCVLAN 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01076 257 CDD bHLH_AtORG2_like 74 150 - -
Bva04g01076 257 Pfam Helix-loop-helix DNA-binding domain 75 126 IPR011598 GO:0046983
Bva04g01076 257 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 72 141 IPR036638 GO:0046983
Bva04g01076 257 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 73 125 IPR011598 GO:0046983
Bva04g01076 257 PANTHER TRANSCRIPTION FACTOR 60 250 - -
Bva04g01076 257 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 60 250 IPR015660 GO:0003700|GO:0006357
Bva04g01076 257 Gene3D - 66 149 IPR036638 GO:0046983
Bva04g01076 257 SMART finulus 79 131 IPR011598 GO:0046983
Bva04g01076 257 Coils Coil 122 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01076 Bva-Chr4 7115473 7116691 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01076 70 234 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25400 44.242 1.28e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva04g01076 HLH 5.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01076 - - gmx:100803786 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01076 04 7115473 7116691 Bva04g01076 04 7115473 7116691 ECH