Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01075 ATGTTTCCTTTCCACCAAAACAATGATTCGCTATTTCAAATATCCTGTGATCTTCAGGAACAGGATACGATTCAGCAATATCAGATTTGGGGCCAACAGTCACTTGAGGGCAGTGATCCTGCCCAGGTAATGGGCAAAGGGAAGCAACATATAATATTACCTACTTGGGAAAATAATGAAGCAAGTGTTGGCAATGATGATAAGAAGATCATTCGTAGGGAAAATGAACGGGAGAGAAGGATGCAAATGTCCACCCTTTGCGCATCGCTTCGATCTTTGCTCCCCTTTGAACTCATCAAGGGAAAGCGTTCTGAGTCGGATCACATAGGCGAGGCtgtcaaatatattttatatttgaaggAGAAGATCGATGTACTTCATATGAAGAGAGATAAACTTAAACGGATGGCTAATCCATGTTTGATTGATGCTGGTATTGAAAGTTCTAATCATTCAAGTTTGGTTAATTATGCCAAGATCGATCTGTTTCCCGGTGGGGCGGAGATCACCATAGACAGTGGTTTTGAGGAGAGCAGTCTCCCTCTGTCACACATACTAGAAATATTGCTTCAAGAAGGATATGATAATATAGTCAGCTATGTCTCTACCAAAGTAAATGGGAGGATAGTTCACTCTATCAAGTCTGAGGTGGGCCGTTTGACACAACTCGATGTAGTGGGGATGCAACAAAAACTGAATAATGCAATCTTTCCTTG 716 0.4064 MFPFHQNNDSLFQISCDLQEQDTIQQYQIWGQQSLEGSDPAQVMGKGKQHIILPTWENNEASVGNDDKKIIRRENERERRMQMSTLCASLRSLLPFELIKGKRSESDHIGEAVKYILYLKEKIDVLHMKRDKLKRMANPCLIDAGIESSNHSSLVNYAKIDLFPGGAEITIDSGFEESSLPLSHILEILLQEGYDNIVSYVSTKVNGRIVHSIKSEVGRLTQLDVVGMQQKLNNAIFP 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01075 238 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 67 119 IPR011598 GO:0046983
Bva04g01075 238 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 17 236 IPR015660 GO:0003700|GO:0006357
Bva04g01075 238 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 17 236 - -
Bva04g01075 238 Gene3D - 60 141 IPR036638 GO:0046983
Bva04g01075 238 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 65 138 IPR036638 GO:0046983
Bva04g01075 238 Pfam Helix-loop-helix DNA-binding domain 72 120 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01075 Bva-Chr4 7109836 7111042 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01075 65 232 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 35.260 1.21e-23 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva04g01075 HLH 9.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01075 - - gmx:100776724 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01075 04 7109836 7111042 Bva04g01075 04 7109836 7111042 ECH