Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01074 ATGAACTTTCAGTTTTCCTCTTGTAATCCTCTTCAGCAACATTCAATCCCACAAGATCTGACGTTGCCATCTACACAAATTGATGGCAAGTGTCCTTACAACAAATCTCCGAAGGGCAGGAAGAGAAAGCAATGTTCACAAGAAGATGATGTTCAGAAGAAGTTGATGCGtaggaaaatagaaaagcaaagaagGCAAGAGATGTCTATCCTTTGCACCTCTCTTAGATCTCAACTCCCTCTTGAATATATCAAGGGAAAGCGCTCAGCATCAGATCACATGAATGAAGCTGCCCAATATATCAAAGACCTGAAGAACAGGATCAAAGAACTGAGTGCCAAGAGGGATAAGCTaagaaaattatctaattCGTATGCCATTGAAACAGATATTACAACCATATGTGCTGACCATGCACCAGCAAATGTTTCTGTCCATCAATGTTTCAGTGGGTTTGAGGTTATGCTGAGTGGCAGCACCAGGGTGCAAATGTTGCCTCTATCAAGAGTAATGGATATGCTGCTCAAAGAGGGCCTTAAAGTTGTTAACTGCATTTCTACAAAGGCAGAACACAGGTGGATACACACCATCTATGTAGAGGTTTCTGACCCGATCCACATCGACTGCAGTATACTGGAAAGAAAACTAGAACAAGCAATTCCttctttaagaaaaacttCTCTCTG 686 0.3936 MNFQFSSCNPLQQHSIPQDLTLPSTQIDGKCPYNKSPKGRKRKQCSQEDDVQKKLMRRKIEKQRRQEMSILCTSLRSQLPLEYIKGKRSASDHMNEAAQYIKDLKNRIKELSAKRDKLRKLSNSYAIETDITTICADHAPANVSVHQCFSGFEVMLSGSTRVQMLPLSRVMDMLLKEGLKVVNCISTKAEHRWIHTIYVEVSDPIHIDCSILERKLEQAIPSLRKTSL 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01074 228 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 52 120 IPR036638 GO:0046983
Bva04g01074 228 MobiDBLite consensus disorder prediction 1 51 - -
Bva04g01074 228 Coils Coil 94 121 - -
Bva04g01074 228 MobiDBLite consensus disorder prediction 1 31 - -
Bva04g01074 228 Pfam Helix-loop-helix DNA-binding domain 54 104 IPR011598 GO:0046983
Bva04g01074 228 Gene3D - 43 131 IPR036638 GO:0046983
Bva04g01074 228 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 11 221 IPR015660 GO:0003700|GO:0006357
Bva04g01074 228 PANTHER TRANSCRIPTION FACTOR BHLH120-RELATED 11 221 - -
Bva04g01074 228 CDD bHLH_AtORG2_like 53 123 - -
Bva04g01074 228 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 52 104 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01074 Bva-Chr4 7104490 7105848 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01074 32 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51790 43.316 4.58e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva04g01074 HLH 6.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01074 - - dzi:111291003 189.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01074 04 7104490 7105848 Bva04g01074 04 7104490 7105848 ECH