Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01073 ATGTTTCCTTTAAACGGAGGCAATGAGCTGGTGATCCAGTTTTCTTCTTGTCCCCACAAGCAGCAACACAATATCTCAGAGGATCTGATTTTGGATGGTTACTGTTCTCCAGATTCCTGTGATTTTGCTAAAACAGTGGGCAACAGCCAGCAGAAGAAACTATCTCATGGGGATCAAAAGAATTTTGGTCAACATTTTCCCCGTGAAaacaggaagaagaaaatgatccACAGGGAGATTGAAAGGCAGAGGAGGCGACAAATGGCTACCCTTCATGCTTCGCTTAGAtctcttcttcctttaaaGTTCATCAAGGGTAAGCGTTCAATATCAGATCACATGAACGAAGCAGTGAATTATATAAAGcagttgaagaaaaatatcaaagaacTAAGTGCCAAGAGAgatgaaataaagaaactgTCCTATTCCTGTACGGAAAACCATGATAGCAATAACACATCTGGGACCGGTAGCTTTGTCATCCATGAGAATGATGGTGCTATTGGCATTGAAATTGCTAATGGCTGCAGAGAGGAAAATTTCCCCCTTTCAAAATTGCTGGAATTGCTGCTTGAGGAAGGTCTTGAAGTTGTTAATTGCCTTTCAAGCGAGGTGAATGGCAGATTAATTCACAGTGTACAGTGTGAGGTTAACAATTCCAAAAGTTTGGATCTGCCTGAGCTGAGAAGGAAAGTTTCAAtgttattccattttttata 722 0.3643 MFPLNGGNELVIQFSSCPHKQQHNISEDLILDGYCSPDSCDFAKTVGNSQQKKLSHGDQKNFGQHFPRENRKKKMIHREIERQRRRQMATLHASLRSLLPLKFIKGKRSISDHMNEAVNYIKQLKKNIKELSAKRDEIKKLSYSCTENHDSNNTSGTGSFVIHENDGAIGIEIANGCREENFPLSKLLELLLEEGLEVVNCLSSEVNGRLIHSVQCEVNNSKSLDLPELRRKVSMLFHFL 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01073 240 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 236 - -
Bva04g01073 240 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 139 IPR036638 GO:0046983
Bva04g01073 240 SMART finulus 78 130 IPR011598 GO:0046983
Bva04g01073 240 Coils Coil 114 141 - -
Bva04g01073 240 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 72 124 IPR011598 GO:0046983
Bva04g01073 240 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 236 IPR015660 GO:0003700|GO:0006357
Bva04g01073 240 CDD bHLH_AtORG2_like 73 142 - -
Bva04g01073 240 Gene3D - 64 151 IPR036638 GO:0046983
Bva04g01073 240 Pfam Helix-loop-helix DNA-binding domain 73 125 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01073 Bva-Chr4 7095302 7097797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01073 77 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 47.024 1.34e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva04g01073 HLH 1.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01073 - - gmx:100780888 251.136