Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01072 ATGCCATCTAGGCAGCTCTCCACTTCTCCGCCGTCTACGGTTGTTTCCGACGCATACCCACCTAGCCTTCCTCCTGACCAAGTACACCACCATAACCACTACAAAAACCACCTCCTTTTGCCTCCTATCCTTGCTTCCACCGTTTCTGcttgctctttcttctttgtcgTTCTTCTCTGTTTTCGCAGACTCACTCGTAAACGCACAACCCCTTCTTCTGATTCTGAATCCAAGCCTCCTTATCGTTTCTCATACTCTCATCTCCGCCGTGCTACCTCTTCCTTCTCCACTCGTCTTGGTCATGGCGGCTTCGGCCCAGTCTTCTCTGGCACCTTGCCTTCGACCCGTCAACCTATCGCCGTCAAGCTCATGGACTCTACCTCTCTTCAGGGCGAGCGCGAATTTCACAACGAGCTTTTCTTCGCTTCCAGGCTTAGTTCACAGCATCTTGTCTCAGCTATCGGCTTCTCATCTGACAACAAGCGTCGCAGATTTTTGCTCGTATATGAACTGATGCAAAACGGCAACCTCCAAGACGCGCTTTTGCACCGTAAGTGCCCCGAGTTGATGGAATGGAAGAAGCGTTTCGCCATCATCGTTGATATAGCTAAAGGGATTCAATACCTTCACTCTTGCGACCCACCTGTGATTCATGGTGATATCAAGCCTAGTAATATCCTATTGGACGGttatttttctgcaaaaaTTGGGGATTTTGGGCTTGCTCGGTTGAAATCGGAATCCCAATTCGAAATTGGGATTCTGGGTGTAGATGGAATGGGACAGAAGAATGATGGGTTGGATATGGAGGACAACAAGAGGAAAGAGGAGCTGGAGAGTAACTGTGTGGTTGGAAATGATGATTGCGGGTCACTGGTTGAGGAAACTGAGAGTGTGAATACTGGTTTTGAGGAAGGTAGCATAGGTGCAGAGCAGTCACCGGATGTTAGGGTTCATATATTGGAGACATCCCCGGAGACAATTGAGGCGGCAACAACTTCGGCAGCGGTGATGTCACTGGAGGGGACTTTGGACAAGGCTAGTATTCAGAATGAGAAAGATATTGTTGGAGATGCTAAGAATGATAAAGTGTTTAAGAGTCGTTCAGTGAAAGAATGGTGGCGGGAGCACGATATTGAGGCGGCAGCAGTGGCTGCTCCTGTTGAGAATAAGAAAGTAAAGGATTATGTGATGGAGTGGATTGGAAAAGAGGTAAACAAAGATAGACCAAACAGTGATTGGGTTGGAGCTAGTGCTTCAAGTAGCAGAACAACAATGGAGAAgccagagaaaaagaagaataagaagcGATTGGAATGGTGGGCTTTAAAGGACATGGATGGAAATGCcaagaatttgaagaagagaagGCAAGCGAGGGAATGGTGGAAGGAAGAGTACTGTGAGGAGCTTGctaagaagcaaaagaaaaagaaaaaggagcaGCAGAGAAATGGAGTGACTAGTGATGACTTTGACGTCAGTGATAATTGGTGGGAAAAAGATGATGATTTGTAtactgagaaaaagaaaaccaaaaagagaagCCGGGGTAGTCGTGGTAGCCTAGATTGGTGGATGGATGGACTAAGTGGCGAGCTCCGGCGAGCTCGCCGGAATAGCTATGATTCTTACAGTGGAGAAATTCCCAAGAGTGGAGGTATCAGCAGTACACCAAGCATGAGAGGGACAGTTTTTTATGTTGCTCCTGAATATGGTTATGGTGGAGATGTATCAGATAAGTGTGATGTATATAGTTTTGGGGTGTTGTTGTTGGTTATCATTTCTGGGAGACGCCCACTTCAGGTGACTAATTCACCATTATCAGAATTTCAGAGAGCAAATCTTTTGTCTTGGGCTCGAATTTGTGCTCGTAATGGAAAGCTTCTTGATCTGGTTGATCAATCTATACAGTCATTGGATAAAGAGCAGGCTCTTCTATGCATCACGGTTGCCTTGCTTTGTTTGCTCAAGTCACCTGCTCGTCGTCCTTCAATCAAAGAGGTTGTGGGAATGCTTAGTGGAGAGCTAGAGCCACCACAATTACCGGTTGAGTATTCACCATCACCGCCATCTCGCTTCCCTTTCAAGTCTAGGAAACAAGCCCGGTA 2111 0.4405 MPSRQLSTSPPSTVVSDAYPPSLPPDQVHHHNHYKNHLLLPPILASTVSACSFFFVVLLCFRRLTRKRTTPSSDSESKPPYRFSYSHLRRATSSFSTRLGHGGFGPVFSGTLPSTRQPIAVKLMDSTSLQGEREFHNELFFASRLSSQHLVSAIGFSSDNKRRRFLLVYELMQNGNLQDALLHRKCPELMEWKKRFAIIVDIAKGIQYLHSCDPPVIHGDIKPSNILLDGYFSAKIGDFGLARLKSESQFEIGILGVDGMGQKNDGLDMEDNKRKEELESNCVVGNDDCGSLVEETESVNTGFEEGSIGAEQSPDVRVHILETSPETIEAATTSAAVMSLEGTLDKASIQNEKDIVGDAKNDKVFKSRSVKEWWREHDIEAAAVAAPVENKKVKDYVMEWIGKEVNKDRPNSDWVGASASSSRTTMEKPEKKKNKKRLEWWALKDMDGNAKNLKKRRQAREWWKEEYCEELAKKQKKKKKEQQRNGVTSDDFDVSDNWWEKDDDLYTEKKKTKKRSRGSRGSLDWWMDGLSGELRRARRNSYDSYSGEIPKSGGISSTPSMRGTVFYVAPEYGYGGDVSDKCDVYSFGVLLLVIISGRRPLQVTNSPLSEFQRANLLSWARICARNGKLLDLVDQSIQSLDKEQALLCITVALLCLLKSPARRPSIKEVVGMLSGELEPPQLPVEYSPSPPSRFPFKSRKQAR 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01072 703 Gene3D Phosphorylase Kinase; domain 1 81 171 - -
Bva04g01072 703 PANTHER OS07G0586332 PROTEIN 20 703 IPR044576 -
Bva04g01072 703 ProSiteProfiles Protein kinase domain profile. 93 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01072 703 MobiDBLite consensus disorder prediction 678 703 - -
Bva04g01072 703 Pfam Protein tyrosine and serine/threonine kinase 95 246 IPR001245 GO:0004672|GO:0006468
Bva04g01072 703 SUPERFAMILY Protein kinase-like (PK-like) 70 694 IPR011009 -
Bva04g01072 703 SMART serkin_6 93 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01072 703 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 20 703 - -
Bva04g01072 703 MobiDBLite consensus disorder prediction 1 27 - -
Bva04g01072 703 Coils Coil 464 484 - -
Bva04g01072 703 Gene3D Transferase(Phosphotransferase) domain 1 172 266 - -
Bva04g01072 703 Gene3D Transferase(Phosphotransferase) domain 1 530 680 - -
Bva04g01072 703 MobiDBLite consensus disorder prediction 408 435 - -
Bva04g01072 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Bva04g01072 703 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01072 Bva-Chr4 7083202 7086109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01072 551 670 Receptor kinase-like Gene Family AT3G58690 32.520 1.74e-10 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Bva04g01072 PK_Tyr_Ser-Thr 2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01072 - - lja:Lj2g3v0473820.1 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01072 04 7083202 7086109 Bva04g01072 04 7083202 7086109 ECH