Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01057 atggaagaaaaagaaagttttgatTCTGGGCTCGCCGTGAAGGGCGACGAAGCCCCAGAGAGCTACCACGTAGCTCCGAGAAATGAGAGCACCGGGACCACAGCGCCGGCGCCGGCACCGTCGACGGTTAGTTTCGCGGCGACGCCAGGAACGACGCCCGGTACGaaagtaaagaagaaaagggggAGGCCTAGGAAGTACGGCCCTGACGGGAAAGCAGCGTTGCCGTTATCCCCGATGCCGATTTCATCTTCAATTCCGTTGACTGGTGAGTTCTCAGCTTGGAAACGGGGTAGAGGGCGGCCTCTTGATTCGATCAAGAAGACATATAAGTATGACTACGAAACTACTGGTCCAGGTCACGGAATTGCATACTCAGTTGGTGCCAATTTCACACCCCACGTGCTTACAGTTAATACTGGCGAGGATATTATTATGAAGGTTATGTCCTTCTCTCAACAAGGATCACGTGCTATCTGTGTTCTTTCTGCAAATGGCACGATTTCAAATGTTACACTTCGTCAACCGACTTCTTCTGGGGGTACTTTAACATACGAGGGACGATTCGAGATTCTTTCCTTGTCTGGTTCATTTATGCCAACTGAGAATGGAGTAACAAGGAGCAGATCTGGCGGAATGAGTGTCTCTTTGGCTGGTCCAGATGGTCGTGTAATAGGTGGCGGACTTGCTGGTCTGTTGGTAGCTGCTGGCCCAGTACAGGTTGTCGTGGGCAGTTTTCTTCCTGGTCACCAGCAAGAGCAGAAAGCCAAGAAGCAAAAGGTGGAGCATATAACAACTATTACCCCAACCCATGTTAATGCTATCACTGATGAAGGAATAAAAGTCAGTTTTGGAGGTGTAAAGCCTATTATGACCCCTGCTGCTTTTCAAGGAGACAGTATTACCTCTTTTAACAATGTTCAAGGCCCTAGGATCTCTTCTGATGATGATAAAACTCCCTTGCCTGAAAAGGAGTCTAATCCCAGCCAACCAAATGCTGAGGTTCAATGCTA 1013 0.4719 MEEKESFDSGLAVKGDEAPESYHVAPRNESTGTTAPAPAPSTVSFAATPGTTPGTKVKKKRGRPRKYGPDGKAALPLSPMPISSSIPLTGEFSAWKRGRGRPLDSIKKTYKYDYETTGPGHGIAYSVGANFTPHVLTVNTGEDIIMKVMSFSQQGSRAICVLSANGTISNVTLRQPTSSGGTLTYEGRFEILSLSGSFMPTENGVTRSRSGGMSVSLAGPDGRVIGGGLAGLLVAAGPVQVVVGSFLPGHQQEQKAKKQKVEHITTITPTHVNAITDEGIKVSFGGVKPIMTPAAFQGDSITSFNNVQGPRISSDDDKTPLPEKESNPSQPNAEVQC 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01057 337 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 7 325 IPR039605 GO:0003680
Bva04g01057 337 ProSiteProfiles PPC domain profile profile. 128 270 IPR005175 -
Bva04g01057 337 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 7 325 - -
Bva04g01057 337 Gene3D - 133 268 - -
Bva04g01057 337 MobiDBLite consensus disorder prediction 1 80 - -
Bva04g01057 337 SUPERFAMILY AF0104/ALDC/Ptd012-like 130 253 - -
Bva04g01057 337 MobiDBLite consensus disorder prediction 301 337 - -
Bva04g01057 337 Pfam Plants and Prokaryotes Conserved (PCC) domain 133 246 IPR005175 -
Bva04g01057 337 MobiDBLite consensus disorder prediction 26 51 - -
Bva04g01057 337 CDD DUF296 132 246 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01057 Bva-Chr4 6959270 6963984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01057 52 262 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 64.091 4.83e-91 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01057 - - gmx:100789179 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01057 04 6959270 6963984 Bva04g01057 04 6959270 6963984 ECH