Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01050 atgggatTTTTAGTGTTTGTTCTCCTCTCTCTCCTGGTTTTCCTCTTTAACCCAACATGGGTCTGTGGGAATGAAGAGCTAAGAGCTCTGATGGACATCAAGTCCAGTTTGGACCCTGAAAGCCAGTTTCTTTCTTCGTGGACCATCAATGGCAACCCATGTGAGGACTCTTTTGAAGGAGTAGCTTGCAATGACAAGGGTCAGGTTGCAAATATTTCTTTGCAGGGAAAGGGCCTCACCGGCAAGCTCTCTCCAGCCATTGCTGGGCTCAAGCACTTGACAGGGCTTTACTTGCATTACAACTCTCTGTACGGGGAGATACCCAAAGAAATTGCAAACTTGACTGAGTTAAGTgatttgtatttgaatgtCAACCACCTGTCTGGTGAAATTCCTCATGAGATCGGCAAAATGGAGAACTTGCAAGTTTTGCAGCTTTGTTATAACCAGTTGACAGGAAGTATTCCTACACAGTTTGGTTCTCTGAAGAAGCTTAGTGTTCTTGCACTGCAGTCAAACCAATTAACAGGTGCTATCCCTGCTAGTTTAGGCGATCTGGGAATGTTAACAAGGCTAGATTTGAGCTCTAATCGCCTCTTTGGTTCCATTCCTACTAAATTAGCTGATGTTCCTTCTCTGCAAGTTCTGGATGTTCACAATAACACTCTCTCTGGGAATGTACCTCCTGCTTTGAAGAGACTAGAAGATGGATTCTTGTATGAATACAATCTGGGTTTATGCGGAGTTGGGTTCTCATCCTTGAAAACTTGCAATTCTTCCGAACATGGCAATCCAAGCAGACCTGAACCTTATGGAGAAGGTGTAAATGGTCTATCTACAAGAGAAATCCCAGAAACAGCAGATGTACAGTTACCTTGCAACGGAACTCGGTGCCACACTTCATCAAAATCCAAAGGAACTTCCATAGCTATTGGCATTGTTGTGTTTACAATTGCAGTATCAGCAATAGGCATTCTGACTTTCACACAATATCGTAGGCGAAAACAAAAGCTTGGAATCTCCTTTGATATCACTGATAACCGTCTAAGTACTGATCAAGCCAAGGGGATATACAGGAAGAATGGCTCTCCTTTGGTCAGCCTTGAGTACTCTAATGGATGGGATCCCTTGGCTGATAGCCGGAATTTCAACGGGGACAGTGAAGATTTGTTTCAGAGTTTCAGGTTCAACTTGGAAGAGGTGGAGACTGCTACTCAGTATTTCTCAGACATGAATTTGTTGGGTAAGAGTAACTTCAGTGCAACATATAAAGGAGTCTTAAGAGATGGGTCTGTTGTTGCCATTAAGAGGATAAGTAAAACTAGTTGCAAGTCAGATGAAGCTGAATTTTTGAAGGGATTGAACATTTTGACCTCACTAAGGAATGAAAATTTAGTGAGGTTGAGGGGATTTTGTTGTTCAAGGGGCCGAGGCGAGTGCTTTCTGATATATGATTTTGTTCCCAATGAAAACTTGACGCGCTACCTTGATGTGAAGGAAGGTGATGGAGAAGTTCTTGAATGGTCCACTAGAGTTTCTATTGCAAAAGGAATTGCCAAAGGCATAGCATATTTACATGCACACAAGTTGAATGAACCAGCACTTGTTCACCAGAACATTTCAGCCAAGAAAGTGCTCATCGATCAGCGATTCAACCCATTGCTTTCAGATTCAGGTCTGTGCAAGCTTCTTACTAATGACATTGTCTTCTCAGAACTTAAAGCTAGTGCAGCAAAGGGTTATCTGGCTCCTGAATACACCACAACCGGCCGGTTCACTGAGAAAAGTGATGTATATGCATTTGGAGTGTTGCTTTTCCAAATCATCTCAGGGAAGCAGAAGATCACAAGCTCAATGCGCCTTGCTGCAGAATCCTGTAGACTTCAAGAACTCATTGACCCAAATCTCCATGGCAGGTTCTTTGAGTACGAGGCGGCTATGTTAGCAAAAATGGCTTTGCTTTGCTCCCATGAATCTACTTTTGAGAGGCCATCCATGGAAACCATTGTTCAGGAGCTGGGAAACTGCAGTAGCTGTCTCTG 2042 0.428 MGFLVFVLLSLLVFLFNPTWVCGNEELRALMDIKSSLDPESQFLSSWTINGNPCEDSFEGVACNDKGQVANISLQGKGLTGKLSPAIAGLKHLTGLYLHYNSLYGEIPKEIANLTELSDLYLNVNHLSGEIPHEIGKMENLQVLQLCYNQLTGSIPTQFGSLKKLSVLALQSNQLTGAIPASLGDLGMLTRLDLSSNRLFGSIPTKLADVPSLQVLDVHNNTLSGNVPPALKRLEDGFLYEYNLGLCGVGFSSLKTCNSSEHGNPSRPEPYGEGVNGLSTREIPETADVQLPCNGTRCHTSSKSKGTSIAIGIVVFTIAVSAIGILTFTQYRRRKQKLGISFDITDNRLSTDQAKGIYRKNGSPLVSLEYSNGWDPLADSRNFNGDSEDLFQSFRFNLEEVETATQYFSDMNLLGKSNFSATYKGVLRDGSVVAIKRISKTSCKSDEAEFLKGLNILTSLRNENLVRLRGFCCSRGRGECFLIYDFVPNENLTRYLDVKEGDGEVLEWSTRVSIAKGIAKGIAYLHAHKLNEPALVHQNISAKKVLIDQRFNPLLSDSGLCKLLTNDIVFSELKASAAKGYLAPEYTTTGRFTEKSDVYAFGVLLFQIISGKQKITSSMRLAAESCRLQELIDPNLHGRFFEYEAAMLAKMALLCSHESTFERPSMETIVQELGNCSSCL 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01050 680 Pfam Protein tyrosine and serine/threonine kinase 412 673 IPR001245 GO:0004672|GO:0006468
Bva04g01050 680 CDD STKc_IRAK 414 673 - -
Bva04g01050 680 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Bva04g01050 680 SUPERFAMILY L domain-like 22 233 - -
Bva04g01050 680 SUPERFAMILY Protein kinase-like (PK-like) 384 673 IPR011009 -
Bva04g01050 680 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 3 678 - -
Bva04g01050 680 Gene3D Ribonuclease Inhibitor 174 237 IPR032675 -
Bva04g01050 680 Gene3D Ribonuclease Inhibitor 22 173 IPR032675 -
Bva04g01050 680 Gene3D Phosphorylase Kinase; domain 1 379 486 - -
Bva04g01050 680 Gene3D Transferase(Phosphotransferase) domain 1 488 679 - -
Bva04g01050 680 ProSiteProfiles Protein kinase domain profile. 408 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01050 680 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 3 678 - -
Bva04g01050 680 Pfam Leucine rich repeat 140 199 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01050 Bva-Chr4 6902276 6906153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01050 7 521 Miscellaneous Gene Families AT4G22730 56.190 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Bva04g01050 PK_Tyr_Ser-Thr 2.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01050 - - gmx:100789253 1139.41