Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01038 ATGGATAATGCCAACTATGTTCATTTTGGTAAAAGGCCAAGCCATGCTCTAACTTCGGAAGAGGTCAAgccagagaagaagaaaataactatAAGGTACAAAGAATGCCTTAAAAACCATGCAGCTGCAATTGGTGGAAATGCCACTGATGGGTGTGGTGAGTTCATGCCTAGTGGAGACGAAGGAACCCTTGAGGCTCTCAAGTGCTCAGCCTGCAATTGCCACAGAAACTTCCACAGAAAAGTGATTGAATCTGAATCATCTGATCAAGAAAAGTGCTTCTCTTCTCAAAATCACTTCCTAAAAGTGCTTCCCGTTGCTGATCAGGCAAAGCCCACTTTGGGTCAATATTTAATACCTCCCAAGAAAAGTGGCTCAAGTGCTTATGATGATCACTCTTATGAGAAGGAGAGGAAGAGGTTCAGGACCAAGTTCAGTCAAGAACAGAAGGAGAAGATGCTGAGGTTTGCAGAAAAAGCTGGGTGGAGAATACAGAAGCTGGATGAATCTCTAGTGCAGCAGTTTTGCCAAGAGATTGGAATCAAGAGAAGAGTCCTCAAAGTGTGGATGCACAATAACAAGAACACTTTTGTCAAGAGAAACTTCATCTCCAGTGTTTCTCCACTAGAAGCTACctg 638 0.4154 MPSGDEGTLEALKCSACNCHRNFHRKVIESESSDQEKCFSSQNHFLKVLPVADQAKPTLGQYLIPPKKSGSSAYDDHSYEKERKRFRTKFSQEQKEKMLRFAEKAGWRIQKLDESLVQQFCQEIGIKRRVLKVWMHNNKNTFVKRNFISSVSPLEAT 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01038 157 Pfam ZF-HD protein dimerisation region 1 28 IPR006456 -
Bva04g01038 157 SUPERFAMILY Homeodomain-like 70 143 IPR009057 -
Bva04g01038 157 Gene3D - 68 143 - -
Bva04g01038 157 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 1 27 IPR006456 -
Bva04g01038 157 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 4 1 145 - -
Bva04g01038 157 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 1 145 - -
Bva04g01038 157 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 83 140 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01038 Bva-Chr4 6842749 6843914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01038 1 156 ZF-HD Transcription Factor Family AT2G02540 45.550 2.01e-43 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bva04g01038 ZF-HD_dimer 7.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01038 - - gmx:100793926 180.259