Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01036 ATGGCTACAAGGCGTCTGAGGGTATTCAAGCGATGGATGAAATCTCAGGGGATCGAATGGAGCGATGCGCTGGAGTTCACATGGAGTCCAGAAGAAGGGTTTGCCGTGAGAGCCCTGTGCGAACTGAAGGAAGGTGATGTTGTTGCCAATATACCGAAGGAGTCTTGCCTTACCATCAAGACTAGTGGGGCATCTGAGATGATTGAAGCTGCAGACTTGGGCGGTAATTTGGGGCTTGCAGTAGCTATAATGTATGAGAGAAGCTTGGGCAAGGACTCACCCTGGGTTGGGTACCTTCAGCTGTTACCTGACCAAGAGTGCGTGCCAATTGTTTGGACTCTCAATGAAGTTGACGAGCTTTTGTGTGGGACTGAGCTTCACAAGACAGTGCAAGAGGACAGAACTCTCATCTGTGAGGACTGGAAAGAGAATATTTTGCCCCTATTGGACATAGCTCCTTCAAAGCtcaatccaaaattttttgGTATTGAACAATACTTCGCTGCAAAAAGTCTCATTACTTCACGAGCTTTTGAGATAGATGATTACCATGGTTTTGGTATGGTTCCTTTGGCAGATCTATTTAATCATAAAACTGGTGCTGAGGATGTGCATTTCACCTCTTCATCCTCTCACTATGAATCTGACTCTGATCCTGACGGTGATTACACTGATGAAGAACCATTGACTCAAAATTCTTCCATAGATGATTCTGAGTTGAATACTGTTCTCACTGAGAAGTCTAGTGGTAGTGACTTGGAGTCCTGTTCAGTCACCGGGGATGATCCTTCTATACTGGAGATGATTATGGTAAAAGATGTCAGCATTGGGTCTGAGGTATTTAATACTTACGGATTAATGGGTAATGCTGCTTTGCTTCATAGATATGGATTTACTGAGCAAGACAACAGCTATGATATCGTGAACATCGATTTAGAACTGGTACTCAAGTGGAGTTCTTCTCTGTTTTCTGGCCGCTACAGTAGAACAAGACTCTCCCTTTGGAGAAGATTGGGCTATTCTGCATGTGCTAGTCAAGACTCGGAATATTTCGAGGTTTCATTCAATGGGGAACCACAGATTGAACTCTTGATTTTACTATACATCATCTTCTTACCAGAAGATACTTACTGTGAGTTCGATCTCGGATCATCAATGGCTGGAAAGTTTTATGCTTCAAGTAAAATGACTGATTTGGAGCATAAGATCTTTCTGAATAAAACATCTGATGTGAATAAGAAATACCTGCTGACAAGAAATGTCTGTGATGCTTTGTTGGCGCTTGCTGATTCGCGGGAGAGTTTATATGGTCCCAACTCGATAGACGATGATGTTGAGGCATTAAGAAGATGTAGCTGTGTCAAAGAGAAAAAGCTGTACCATTCTTTGGTGCTGCGGATCAGTGAGAGAAAGATCCTTGAGAAGCTCAGGAGCTATGCTGCCCAGCCATTTAAAAGGGTTAAGCTGAAGCCAGGCTCTGGGAGGAAGAAGTTGAAAAAGGGCAACAAATG 1511 0.4302 MATRRLRVFKRWMKSQGIEWSDALEFTWSPEEGFAVRALCELKEGDVVANIPKESCLTIKTSGASEMIEAADLGGNLGLAVAIMYERSLGKDSPWVGYLQLLPDQECVPIVWTLNEVDELLCGTELHKTVQEDRTLICEDWKENILPLLDIAPSKLNPKFFGIEQYFAAKSLITSRAFEIDDYHGFGMVPLADLFNHKTGAEDVHFTSSSSHYESDSDPDGDYTDEEPLTQNSSIDDSELNTVLTEKSSGSDLESCSVTGDDPSILEMIMVKDVSIGSEVFNTYGLMGNAALLHRYGFTEQDNSYDIVNIDLELVLKWSSSLFSGRYSRTRLSLWRRLGYSACASQDSEYFEVSFNGEPQIELLILLYIIFLPEDTYCEFDLGSSMAGKFYASSKMTDLEHKIFLNKTSDVNKKYLLTRNVCDALLALADSRESLYGPNSIDDDVEALRRCSCVKEKKLYHSLVLRISERKILEKLRSYAAQPFKRVKLKPGSGRKKLKKGNK 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01036 503 Pfam SET domain 33 285 IPR001214 GO:0005515
Bva04g01036 503 SUPERFAMILY SET domain 5 205 IPR046341 -
Bva04g01036 503 CDD SET_LSMT 23 299 - -
Bva04g01036 503 Gene3D set domain protein methyltransferase, domain 1 2 298 - -
Bva04g01036 503 PANTHER RIBOSOMAL LYSINE N-METHYLTRANSFERASE 3 9 482 - -
Bva04g01036 503 ProSiteProfiles SET domain profile. 22 285 IPR001214 GO:0005515
Bva04g01036 503 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 9 482 - -
Bva04g01036 503 PIRSF RMS1_SET 1 483 IPR011383 GO:0016279|GO:0018026
Bva04g01036 503 SUPERFAMILY SET domain 262 304 IPR046341 -
Bva04g01036 503 MobiDBLite consensus disorder prediction 206 233 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01036 1 493 NAC Transcription Factor Family AT3G56570 55.514 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bva04g01036 SET 1.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01036 K05302 - vra:106769924 678.707