Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01009 ATGAGAAGTGCTGAAGCATATCGAGTGGCTATGGAGATAGAGGCAAGCAAACCAGCATTGAATGGAGCAGCACTGCCAGGTTTGAGCCCTTTGAGTGAGACCCTTTGGAGGGAGAAGACCAACACAGAGTTGATAGGAGATGTCTCTGCTAGGCTAACTTGGAAGGATCTAACAGTGATGGTTACTCTCAGCAACGGAGAAACCCAGAACGTTCTAGAAGGGCTAACAGGTTATGCAGAACCAGGAACCTTCACAGCTCTCATGGGTCCATCTGGTTCAGGCAAATCTACTCTGCTTGATGCTCTTTCTAGTCGTCTTGCTGCAAATGCCTTCCTTTCTGGCACCATTCTACTCAATGGCCGCAAAGCTAAACTTTCCTTTGGAACTGCCGCTTATGTGACTCAAGATGATAATTTGATTGGCACTCTAACCGTGAGGGAAATGATAGCATATTCGGCTCGGCTACGTCTACCGGATAAGATGCCATGGTCAGATAAAAGAGCACTGGTTGAGAGTACCATTATAGCAATGGGTCTTCAGGATTGTGCTGACACTGCTATTGGAAACTGGCACTTGCGTGGGATCAGTggaggagagaagagaagggtTAGCATTGCTCTGGAAATCTTGACAAGACCAAGGCTGCTTTTCCTTGATGAGCCAACCAGTGGACTTGACAGTGCTTCTGCGTTCTTTGTGACTCAGACTCTACGTGCCCTTGCAAGGGATGGGCGAACAGTTATAGCCTCTATTCATCAGCCAAGTAgtgaagtatttgagctatTTGACCAATTGTACTTGCTTTCTGGGGGCAAAACTGTTTACTTTGGCCAGGCTTCGGAAGCATACGAGTTCTTTGCACAAGCTGGGTTTCCATGCCCTGCTTTGAGGAATCCGTCTGATCATTTCCTTAGATGCGTCAATTCTGATTTTGACAAAGTGAAAACCACGCTCAAAGGGTCCATGAAACTCAGGTTTGAAGGAAGCGATGATCCTCTGGACAAGATCACTACAGCTGAAGCTATCAGAACTCTCTTTGACTACTACGGCACATCTCAGCACTCTGACGCTGCAAGACAGAAAGTTGATGAGATATCCAAAGTTAAAGGAACTGTGCTGGATGCAGGAGGAAGTCAGGCTAGTTTCTTGATGCAAGCTTTTACCTTGACCAAACGTTCATTCATAAACATGTCAAGGGATTTTGGCTATTACTGGCTTAGGCTTGTAATCTACATTGTAGTGACCATCTGTATTGGAACCATCTATTTGAACGTCGGCACGGGCTACAACTCAATTCTGGCAAGGGGTTCTTGTGCATCTTTTGTCTTTGGTTTTGTCACCTTCATGTCAATTGGTGGGTTCCCTTCATTTGTTGAAGACATGAAGGTTTTCCAAAGGGAGAGGTTGAATGGCCACTATGGTGTCACTGCATTTGTCATCAGCAACACATTGTCTGCCATGCCATTTCTGATATTGATCACATTTCTCTCTGGGACAATTTGCTACTTCATGGTTCGCCTCCATCCCGGCTTTTGGCATTATCTGTTCTTTGTGTTGTGTCTCTATGCCAGTGTCACAGTGGTGGAAAGCTTGATGATGGCCATTGCCAGTATTGTGCCCAACTTCCTCATGGGTATCATAATAGGAGCTGGAATTCAGGGCATTTTCATGTTAGTCTCTGGCTACTTTAGGCTCCCAAATGATATCCCAAAGCCGGTGTGGCGCTACCCAATGTCATTTATCAGTTTCCATTTCTGGGCATTACAGGGGCAATACCAGAATGATCTGCGGGGCTTGATGTTCGACAACCAGACACCAGATCTTCCCAAGATTCCTGGCGAATACGTTCTGGAAAATGTCTTCCAGATCGATGTCAACCGATCAAAGTGGATCAATTTGAGTGTAATTCTCAGCATGATAGTCATCTACAggatcttcttcttcatcatgaTCAAAGTCAATGAGGATGTGACCCCGTGGATTAGAGGTTATATAGCTAGGAGAAGAATGCAGCAGAAGAATGGAACCCAGAATACAACTATTGCACCAGATGTTCTCACACTGTCTCCATCTCTCAGAACCTATATTTCCAGCCAAACAAGTGCTTCTCGCAAGAGGTA 2120 0.4425 MRSAEAYRVAMEIEASKPALNGAALPGLSPLSETLWREKTNTELIGDVSARLTWKDLTVMVTLSNGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGTILLNGRKAKLSFGTAAYVTQDDNLIGTLTVREMIAYSARLRLPDKMPWSDKRALVESTIIAMGLQDCADTAIGNWHLRGISGGEKRRVSIALEILTRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGQASEAYEFFAQAGFPCPALRNPSDHFLRCVNSDFDKVKTTLKGSMKLRFEGSDDPLDKITTAEAIRTLFDYYGTSQHSDAARQKVDEISKVKGTVLDAGGSQASFLMQAFTLTKRSFINMSRDFGYYWLRLVIYIVVTICIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVTAFVISNTLSAMPFLILITFLSGTICYFMVRLHPGFWHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPNDIPKPVWRYPMSFISFHFWALQGQYQNDLRGLMFDNQTPDLPKIPGEYVLENVFQIDVNRSKWINLSVILSMIVIYRIFFFIMIKVNEDVTPWIRGYIARRRMQQKNGTQNTTIAPDVLTLSPSLRTYISSQTSASRKR 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01009 706 CDD ABCG_EPDR 49 277 - -
Bva04g01009 706 Gene3D - 46 290 IPR027417 -
Bva04g01009 706 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 52 295 IPR003439 GO:0005524
Bva04g01009 706 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 2 696 - -
Bva04g01009 706 ProSitePatterns ABC transporters family signature. 195 209 IPR017871 GO:0005524
Bva04g01009 706 Pfam ABC-2 type transporter 252 308 IPR043926 GO:0140359
Bva04g01009 706 Pfam ABC transporter 74 223 IPR003439 GO:0005524
Bva04g01009 706 SMART AAA_5 81 252 IPR003593 -
Bva04g01009 706 PANTHER OS04G0528300 PROTEIN 2 696 - -
Bva04g01009 706 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 289 IPR027417 -
Bva04g01009 706 Pfam ABC-2 type transporter 385 591 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01009 Bva-Chr4 6596647 6601711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01009 82 283 Calmodulin-binding Proteins AT2G36910 31.455 1.71e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01009 K05681 - gmx:100803731 1285.4