Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00991 ATGTATTTGACTCTCTGCATACCTTCATTACGCCGGCAAATCCTTCCGGCGCCAGTGTCGAGACTGCTTGTACCATATCAGAAACTGGGTAAGGCTCTCTTTGtatatggtctttctttgattgctAATTTGCATGTGGGTTTCACAAGAAGATATGATCTACCACTAATtgATAAACTAGAAGAGGGCCTTGGGGCTAACAAGAACCAATTCAAGGAAGTTGTGTCCTTGGAAGATGAGTTAAGCAACCAGTTGGCCTATttggaggaaagaaagaaagagttgGAAGAGCAAATCGTTACCATCAAGACAAACATTTCTGTTTTTCCATCAGCCAAGAACTCTGCTgccaagagaaagagagaaatctTTGAGGAAGGGAAGATGCTCAAAGCTCAAAGAGTTGAATTGAAGGAACAAGCAATGAACCTGGGAGACGAGTGGGAATCTGCGAAGAAAATCCAAGCAGATATAAGAGCTGAGTGGTCAAAACTTGGAGAGAAATTTAACAAAAGCCCAAGTGGTGTAAACCATTTCAACTGCTTGAAACTCACCAGAGCCCTTAACATTCATAATTCCTATCTCCAATTGGCTTCAATGGCTTCTAGTTCTGAACTGCAGAAATGGAAGCTTTGGATGCATGACTTGCTTCAAGAAATGACTAAAGAGATTATTCGCAATGAGTCTCCTAGAGAGCCTGGACAACGTAGTAGAATTTGGTTTCACGAGGATATTCTTCATGATTCTTCCAACTTGTTCAAATTGAAATCTCTTCGTACACTTTCCCTTACTGGGTGCTGCAAACTCAGAAAATTTCCTGAGATTGCTGAGAAAATGGATCATTTGACAGAGATCCTTCTCCAAGGGACTTCCATAAAAGAACTGCCTGAGTCAATTGAATATCTAGTTGGGTTAAGATTTTTGTTCTTAGAATTTTGCCGAGAGCATCTCCCCAGTAGCCTTCACAAGTTGCAATGTCTAACTTGTCTTGATCTCACTGGTTGCTCCAAATTTAGAGAGCTTCCCATAAATACAAGATCTAGAGAAGCAAGCAATTGCATATCATTGGAAAGGTTTCCACAATTATCCAGCCCATCAAGTTTCACTTCAGAGGAACTCCCAAGACCCTCTCTAATGAGATTCATTAACTGCCACAAACTGATTAACAAGCAGGAATACTTTTCTGAAGCAGCATTTCCAGGGAACGAGGTCCCAGATTGGTTTGACTATCATAGTACTAATGGTTCAATTTCTCTTGAAGTGGCTTCTGGGCTATATGGTAAGCCTTTGGACTTGTATTTTGGTGCAGTTGTTGAGTTGGACAAAGCTGCTAAGGCAACTGGTATGCTTTCATGTGGATATGATGTTATTATCAATGATCACAAGTTATTGACGCTAGTGAAAAGCTTCTATTCGCTGGAGACAAGTCATGTATGGCTTAATAAGATCAAATGCAGTAATTTCACATGGAGTCTCAACTTTCTGCGTTATTGGAACAACTTTGAGGTTTCTTTTTGGATCTCACAAGTATCATCCAAAGAGAAAGTAAAAGCAACCTTGAAAAGCTGTGGATTCCACATCTTATGCAAGCAACAAGGGTATCAGATTGATCAAACACTAGTTAGGAAGTGTGTACGATA 1640 0.3866 MYLTLCIPSLRRQILPAPVSRLLVPYQKLGKALFVYGLSLIANLHVGFTRRYDLPLIDKLEEGLGANKNQFKEVVSLEDELSNQLAYLEERKKELEEQIVTIKTNISVFPSAKNSAAKRKREIFEEGKMLKAQRVELKEQAMNLGDEWESAKKIQADIRAEWSKLGEKFNKSPSGVNHFNCLKLTRALNIHNSYLQLASMASSSELQKWKLWMHDLLQEMTKEIIRNESPREPGQRSRIWFHEDILHDSSNLFKLKSLRTLSLTGCCKLRKFPEIAEKMDHLTEILLQGTSIKELPESIEYLVGLRFLFLEFCREHLPSSLHKLQCLTCLDLTGCSKFRELPINTRSREASNCISLERFPQLSSPSSFTSEELPRPSLMRFINCHKLINKQEYFSEAAFPGNEVPDWFDYHSTNGSISLEVASGLYGKPLDLYFGAVVELDKAAKATGMLSCGYDVIINDHKLLTLVKSFYSLETSHVWLNKIKCSNFTWSLNFLRYWNNFEVSFWISQVSSKEKVKATLKSCGFHILCKQQGYQIDQTLVRKCVR 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00991 546 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 209 247 IPR044974 GO:0006952
Bva04g00991 546 Coils Coil 78 105 - -
Bva04g00991 546 Pfam C-JID domain 399 531 IPR045344 -
Bva04g00991 546 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 272 527 - -
Bva04g00991 546 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 209 247 - -
Bva04g00991 546 Gene3D Ribonuclease Inhibitor 240 394 IPR032675 -
Bva04g00991 546 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 272 527 IPR044974 GO:0006952
Bva04g00991 546 SUPERFAMILY L domain-like 249 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00991 Bva-Chr4 6474741 6481815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00991 246 369 WRKY Transcription Factor Family AT4G12020 36.508 5.10e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00991 - - lja:Lj2g3v0604110.2 351.673