Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00960 ATGAGGAGCTCTTGTGAGGTTATCTTCGGATTACTCATTCCCACAGTTACTGCTTCGTCTTGGAATAGAGAACGTGCTCAGTGCCAAAAGCCTCTATTTAAATTTCAGCACTTCTATTCAGTTTCTCTTAGTCATCGTAAACAGTGGGTGCCCACTCCAAAATCCAGTTCAGTGAACAAGACAAATAGGAAATACAGGGCTAGTGATTTTTCATGTGGCTGTTCTACTTCTGCTCTATGCTATGGTGCAGAGCCTTCGGAAGATGATTTTGTAGTTGTGAATTTCTACCATTTTCTGTTTATCCAAGACCCAGAAGCAGAAGTTGCCAAACACCTTTCTTTTGTGGAGGGTCTCAACATAAATGGCAGAATCTACATAAATGAACAAGGAATCAATGCGCAGTACAGTGGGCCATCAAAAGTTGCTATGGCATATGTCAACTGGTTGAGAGAGGATAACAGATTTTCTGATATCCTGGTTCAGATTTCTCCATCAGTAAATGGACACGCCTTTCCAAAATTGAAGTTGCGGTATAAGCCCTCACTAGTACAGTTGGAAGGTGGCATATCACATCTTCCTTTGCTTGATCCTTCAATGAGGGCAACACCATTAGCACCTTCAGAATGgagaaataaattgaaagaaatcaaTGGGACTGATCTTACATCAACAAAAGATCCTGATACAAATTACATTCTGTTGGATGTTAGAAATGGTTATGAATGGGATATTGGACATTTCCATGGGGCTCGGCGACCTAATGTGGACTGCTTTAGGAGCACTTCATTTGGTCTGTCTCAGGAAGAGGTCACAGCTTCAGATCCTTTATCAAAtgcagataaagaaaaaacaaatatattgatgTATTGCACTGGAGGGATACGTTGTGATGTATATTCTACAATACTAAgACAGCAGGGCTTTAAGAATTTGTATACCTTGAAGGGAGGTGTTTCTCACTATTTAAAGAACGAAGGTCCAGCAGAATGGATAGgaaatttatttgtgtttgattCCCGTCTGTCTCTCCCTCCTTCTGTTTACCATCCCCAAGCCACAACTGAAACAGGAAGGGTTCAAGTCTCTGAAAAGGATGAGTTTGCAAAATGCTACTTATGTGGTTCAGAAGTCAGTGAGTTGAGGCATAGGAACTGTGCAAATCTTGACTGCAATTTGCTTTTTCTATGCTGCGGAAAATGTGTGAAGGATCTGAGGGGATGTTGTTGTTGGAGATGCACTACTGCACCTCGGCTTAGGCCTGTGCTAACTGGAAATCCGAGATACAAAAAATGGCACATCTATCGTGATGCCGATTTGCAAAGCAAGATGACAACTTCAAGTTG 1343 0.3991 MRSSCEVIFGLLIPTVTASSWNRERAQCQKPLFKFQHFYSVSLSHRKQWVPTPKSSSVNKTNRKYRASDFSCGCSTSALCYGAEPSEDDFVVVNFYHFLFIQDPEAEVAKHLSFVEGLNINGRIYINEQGINAQYSGPSKVAMAYVNWLREDNRFSDILVQISPSVNGHAFPKLKLRYKPSLVQLEGGISHLPLLDPSMRATPLAPSEWRNKLKEINGTDLTSTKDPDTNYILLDVRNGYEWDIGHFHGARRPNVDCFRSTSFGLSQEEVTASDPLSNADKEKTNILMYCTGGIRCDVYSTILRQQGFKNLYTLKGGVSHYLKNEGPAEWIGNLFVFDSRLSLPPSVYHPQATTETGRVQVSEKDEFAKCYLCGSEVSELRHRNCANLDCNLLFLCCGKCVKDLRGCCCWRCTTAPRLRPVLTGNPRYKKWHIYRDADLQSKMTTSS 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00960 447 CDD RHOD_YceA 204 323 - -
Bva04g00960 447 SMART rhod_4 217 327 IPR001763 -
Bva04g00960 447 ProSiteProfiles Rhodanese domain profile. 227 330 IPR001763 -
Bva04g00960 447 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 86 441 IPR020936 -
Bva04g00960 447 Pfam Rhodanese-like domain 229 322 IPR001763 -
Bva04g00960 447 Pfam UPF0176 acylphosphatase like domain 91 180 IPR040503 -
Bva04g00960 447 Gene3D - 81 183 - -
Bva04g00960 447 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 86 441 - -
Bva04g00960 447 Pfam Rhodanase C-terminal 332 413 IPR022111 -
Bva04g00960 447 Gene3D - 196 360 IPR036873 -
Bva04g00960 447 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 193 344 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00960 Bva-Chr4 6314989 6319121 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00960 70 441 Sulfurtransferasese or Rhodanese AT1G17850 66.927 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00960 - - gmx:100814358 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00960 04 6314989 6319121 Bva04g00960 04 6314989 6319121 ECH