Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00955 ATGGAAGTTTGGAAGGGATTTACTCTAAATGATGGTCACCTTCACAAGAtctacaagaagaaaattaagaagggAAAGCAATCAATGGCGCCCGTCGGATTGCCCCCTGGTTTTAGGTTTCATCCAACCGATGAAGAGCTAGTGAATTATTATCTCAAGAGGAAGATCAATGGCCAAGAAATTGAACTTGATATCATTCCTGAGGTTGATCTCTACAAATGTGAGCCATGGGAATTAGCAGAGAAATCATTTTTGCCAAGTAGAGACCCAGAGTGGTACTTCTTTGGACCCAGGGATAGGAAATACCCTAATGGGTTCAGAACGAACAGAGCAACTCAAGCTGGTTACTGGAAGTCTACTGGGAAAGATAGAAAGGTTACAGGCCAAAATAGAGCTATTGGGATGAAGAAAACTCTGGTTTATTACAGAGGGAGAGCTCCTCAAGGCGTCAGAACTGACTGGGTAATGCATGAGTATCGCCTAGATGACAAAGAATTTGAAGACACATCTGGATTACAGGATACTCACGCATTGTGTCGTGTGTTCAAGAAAAATGGAACGTGCTCTGACGTTGAAGAGCAAGGGCAAAGCAGTTTGTCACTAATGGGGAGCCATCAAACCATGCTTAACGACAACGAACCCATGTCGCCGGACGTACCAGGGGCATCATCTTCATGcttggaagaggaagagaaagatgaCTCATGGATGCAATTCATCACAGAAGACGATCCATGGTACTCTTCTAATAATGCAGCCATGCTTGGTGCTGAACAAGTCTCTCATGTCACATTTACAAACta 803 0.4134 MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATQAGYWKSTGKDRKVTGQNRAIGMKKTLVYYRGRAPQGVRTDWVMHEYRLDDKEFEDTSGLQVKNQWDTHALCRVFKKNGTCSDVEEQGQSSLSLMGSHQTMLNDNEPMSPDVPGASSSCLEEEEKDDSWMQFITEDDPWYSSNNAAMLGAEQVSHVTFTN 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00955 244 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 244 - -
Bva04g00955 244 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Bva04g00955 244 SUPERFAMILY NAC domain 4 161 IPR036093 GO:0003677|GO:0006355
Bva04g00955 244 ProSiteProfiles NAC domain profile. 6 161 IPR003441 GO:0003677|GO:0006355
Bva04g00955 244 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 244 - -
Bva04g00955 244 Gene3D NAC domain 15 165 IPR036093 GO:0003677|GO:0006355
Bva04g00955 244 MobiDBLite consensus disorder prediction 188 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00955 Bva-Chr4 6272242 6272541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00955 1 236 NAC Transcription Factor Family AT3G17730 72.000 1.85e-126 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva04g00955 NAM 2.2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00955 - - gmx:100788036 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00955 04 6272242 6272541 Bva04g00955 04 6272242 6272541 ECH