Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00947 ATGGTGATAGCATCTGCAACTCGAGACCCAGAAGCAGGAGAGACTCTGAGCTGCACTTTTGCTTCCAGATATGTGCGTGACCCAGTTCCCAAGTTCAAGATGCCGGTGAGGTCCATACCCAAGGATGCGGCGTATCAGATAATAAAAGACGAGTTGATGCTGGATGGTGCGCCAAGGCTGAACTTGGCGTCGTTTGTGACCACTTGGATGGAGCCTGAGTGCGACAAGCTCATCATGGATTCCCTTAATAAGAACTATGTTGACATGGATGAGTACCCTGTTACCACCGAGCTCCAGAATCGGTGTGTGAATATGATAGCACATCTATACCATGCTCCTATTGAAGATGATGAGGGTGCAGTTGGAGTGGGAACTGTGGGATCATCAGAGGCAATAATGTTAGCAGGTCTAGCTTTTAAGAGGAAATGGCAGACGAAGAGGAAAGCAGAAGGAAAGCCATATGATAATCCCAACATAGTTACTGGGGCCAATGTGCAAGTTTGTTGGGAAAAATTTGCAAGGTACTTTGAGGTTGAGCTCAAGGAAGTGAAACTTTCAGAGGGATATTATGTGATGGACCCTGTGAAAGCAGTAGAAATGGTTGATGAGAACACCATCTGCGTTGCAGCCATTTTGGGGTCAACTCTAACTGGAGAGTTTGAGGATGTGCAGCTACTGAATGAACTTCTCACCAAGAAGAACAAAGAGTCTGGGTGGGATACCCCAATTCATGTTgatgctgctagtggggggttcATTGCTCCATTTCTCTACCCTGATCTCGAGTGGGATTTTCGTGTGCCATTAGTGAAGAGCATCAATGTTAGTGGCCACAAGTATGGTCTGGTGTACCCTGGTGTTGGCTGGGTTGTCTGGAGGAGCAAAGAGGACTTGCCTGAAGATCTTGTCTTTCACATCAACTATCTTGGATCTGATCAACCCACTTTCACCCTCAATTTCTccaaagGCTCAAGTCAAATAATTGCTCAATATTACCAGTTTATACGGCTTGGCTTTGAGGGTTATCAAAATATCATGCGAAACTGCGTGGAGAATGCAAAAATACTAAAGGAAGGAATAGAGAAAACAGGACGGTTTAACATTGTGTCCAAGGATGTTGGTGTGCCACTGGTGGCATTCTCCCTGAAAGACAGCAGCGAACACACAGTGTTTGAGATATCAGATCACCTGAGAAGATTCGGGTGGATAGTTCCGGCCTATACTATGCCGGCCGACGCACAACACATTGTAGTCCTCCGAGTAGTGATCAGGGAAGATTTCAGCCGAAGCTTAGCGGAGAGGCTCGTTTCTGACATTGAGAAGGTTGTCAATCTCTTGGACACGCTTCCAAGCACCGTTCATGCTTCAACCACATCTGCACATGTCACGGCTGTAACTAATGAGACAGGTGACAAGGTTGTGAAGAAGAGTGCGATGGAGACTCAGGCAGAGATTGCCAGGTATTGGAGGGGGCTTGTTAAGGACAAGAGAACTGGAGTGTGTTA 1505 0.4565 MVIASATRDPEAGETLSCTFASRYVRDPVPKFKMPVRSIPKDAAYQIIKDELMLDGAPRLNLASFVTTWMEPECDKLIMDSLNKNYVDMDEYPVTTELQNRCVNMIAHLYHAPIEDDEGAVGVGTVGSSEAIMLAGLAFKRKWQTKRKAEGKPYDNPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVQLLNELLTKKNKESGWDTPIHVDAASGGFIAPFLYPDLEWDFRVPLVKSINVSGHKYGLVYPGVGWVVWRSKEDLPEDLVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYQNIMRNCVENAKILKEGIEKTGRFNIVSKDVGVPLVAFSLKDSSEHTVFEISDHLRRFGWIVPAYTMPADAQHIVVLRVVIREDFSRSLAERLVSDIEKVVNLLDTLPSTVHASTTSAHVTAVTNETGDKVVKKSAMETQAEIARYWRGLVKDKRTGVC 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00947 501 Gene3D - 1 67 - -
Bva04g00947 501 Gene3D - 363 450 - -
Bva04g00947 501 PANTHER GLUTAMATE DECARBOXYLASE 2 501 - -
Bva04g00947 501 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 19 446 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bva04g00947 501 CDD DOPA_deC_like 61 441 - -
Bva04g00947 501 Pfam Pyridoxal-dependent decarboxylase conserved domain 38 383 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bva04g00947 501 SUPERFAMILY PLP-dependent transferases 19 444 IPR015424 -
Bva04g00947 501 PANTHER GLUTAMATE DECARBOXYLASE 2 501 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bva04g00947 501 Gene3D - 68 362 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00947 Bva-Chr4 6208391 6212050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00947 11 499 Calmodulin-binding Proteins AT2G02010 76.687 0.0 802
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00947 K01580 - gmx:100783047 862.062