Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00930 ATGGATGGTGATAATAGTCTTAACATACGTAATTGGGGATACTATGAACCCACAACTTCCCTCAAGAACCATCTCGGGCTCCAGCTCATGTCGTCCCTGCCTGAAAAACCTCTGCTTGGAGTTCGTAATGCTGCTATTTTATCTGGTGCTAGTGGGGCATTTCACCCTAGGGACATGGGGATGCCACAAGTAACCTACCCTATGGATTATACGAGGAATCCTTGGATTTACCATCAGAGAGACAAGTTTGTGAATATGATACCTACGAACCTCACTTATGCTTCAGCTATGCCAGAGACATCTTCAGCTCATCATTTGCAAATGATTCAACCACctgatttttcaaaagaggAAAGGCCAATGCCACcaacaccaccaccaccactgcCACCACCTGTGGAAGAGACACCAGCTGAGAAGACCAATGGCAGTAATAAGAAGAGGCAGGGGCCCAAGGCTCCGAAATCTCCCAAGGCAAAGAAACCCAAGAGAGGGCCCCGTGCACCAAAGGATGAGAATAATCCTTCAGTTCAACGAGCGAGGACTGCAAAGAAAACTACTGAGATTGTAATTAATGGGATTGATATGGATATTTCCAGTATTCCTATTCCAGTTTGTTCATGCACTGGCGCGCCTCAACAGTGTTACAGATGGGGCTCTGGTGGGTGGCAATCTGCATGTTGCACGACAGGCATGTCAGTGTATCCCTTGCCTATGAGTACAAAGCGGCGTGGTGCAAGGATAGCAGGAAGAAAAATGAGCATAGGAGCATTTAAGAAGGTCTTAGAGAAACTCGCAGCTGAGGGTTATAACTTCTCTAATCAAATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTGACTATCAGGTA 884 0.4389 MDGDNSLNIRNWGYYEPTTSLKNHLGLQLMSSLPEKPLLGVRNAAILSGASGAFHPRDMGMPQVTYPMDYTRNPWIYHQRDKFVNMIPTNLTYASAMPETSSAHHLQMIQPPDFSKEERPMPPTPPPPLPPPVEETPAEKTNGSNKKRQGPKAPKSPKAKKPKRGPRAPKDENNPSVQRARTAKKTTEIVINGIDMDISSIPIPVCSCTGAPQQCYRWGSGGWQSACCTTGMSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNQIDLRTYWAKHGTNKFVTIR 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00930 294 Pfam GAGA binding protein-like family 1 294 IPR010409 -
Bva04g00930 294 MobiDBLite consensus disorder prediction 116 135 - -
Bva04g00930 294 PANTHER - 1 294 IPR010409 -
Bva04g00930 294 SMART GAGA_bind_2 1 294 IPR010409 -
Bva04g00930 294 MobiDBLite consensus disorder prediction 113 185 - -
Bva04g00930 294 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00930 Bva-Chr4 6089884 6091489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00930 1 294 BBR or BPC Transcription factor family AT2G01930 50.820 4.15e-97 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Bva04g00930 GAGA_bind 2.2e-110 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00930 - - gmx:606296 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00930 04 6089884 6091489 Bva04g00930 04 6089884 6091489 ECH