Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00924 atgCCCCAGAATAAGATTTTCAATGACCCAACACCGAATCCGATTCCTGATCTTTCCCTGCACATTAGCCTCCCAAACAGTGCTCCTTCTTCAATCTGCACTGGCACAAACGAAGGGGattcttcttcctttgatATATGGAAAAGTGACAGTACTGATGGCTTTAAATCCCACAGTGATAGTTCCATCAGAGGAACAAGCCCAAACACAGACACAGAGCTTTCTCTAGCAGCTGCAGCTGCCAATCCCGTAAGTGCTTCTGAAGCAGAAAGCCCTTGGAGAAGCAACTTTCTTGCTAGAGCCAGAGAACAAGCTCCAAATCTTGGGGCTTCAGAGGGAATAAGACCCATTAAAGGCATACCACTGTACACTAATTTCAATTCTAGAGAGGGGGAATCAAAATTCCCTCTTTACCCAGTTCCATACCCTTCTTGTTCACCAAATTTCTCTGTAAACCAAGGTTCTTATAGGACTTCTACTGGTGTAGAACCCATGCCAAAGTTTAATGGAATCACTATAGACAGTTTAAGACCCCAGCTACTTCAGCATCAGCATCAGTACTTGAATAATCAGCATCAGCATCAGTTTGGGGTTGGAGCTTCTGATTTCTCAAACGGATTCATGAGGCAGAGAATATTGATGCCAAGACCGCAGAGCAAGAGAAACATGAGGGCTCCTCGAATGCGTTGGACCAGCTCTCTTCATGCTCGGTTTATTCATGCTGTTGAGCTGCTTGGTGGCCATGAAAGGGCTACTCCCAAGTCAGTTTTGGAGCTGATGGATGTCAAAGATCTCACTCTTTCTCATGTAAAGAGCCATTTGCAGATGTATCGAACTGTTAAGAACACTGATAAACCTGCAGCTTCTTCCTCAGatgGAGATGAGGATTTCCAGACTATAACAGCAGCAGTAAATCAAGATCAGAACTGTTTACTCAATCAGAGATCAGCAGGTCAAAATGGATCTATAGAGAATGGTGATGTGTCGTGGGGTAATTCTTCCAGTGGAGGAGCATATATACAAGGTAGCTCCAGACATTTGGATAATGGGATCAGAACAGCAGAAATCCCACCATATCAGCACAGAATTCATGGGAAACAGTCTGAGGGAAACAATTTTATCCAATCAAGAAGCTTTAAGAGTTCAAATTTAGACTCAGATATTAATCCAAGCTTGGAGTTCACCTTAGGGAGATG 1196 0.4289 MPQNKIFNDPTPNPIPDLSLHISLPNSAPSSICTGTNEGDSSSFDIWKSDSTDGFKSHSDSSIRGTSPNTDTELSLAAAAANPVSASEAESPWRSNFLARAREQAPNLGASEGIRPIKGIPLYTNFNSREGESKFPLYPVPYPSCSPNFSVNQGSYRTSTGVEPMPKFNGITIDSLRPQLLQHQHQYLNNQHQHQFGVGASDFSNGFMRQRILMPRPQSKRNMRAPRMRWTSSLHARFIHAVELLGGHERATPKSVLELMDVKDLTLSHVKSHLQMYRTVKNTDKPAASSSDGDEDFQTITAAVNQDQNCLLNQRSAGQNGSIENGDVSWGNSSSGGAYIQGSSRHLDNGIRTAEIPPYQHRIHGKQSEGNNFIQSRSFKSSNLDSDINPSLEFTLGR 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00924 398 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 183 398 IPR044847 GO:0000976|GO:0006355|GO:0010158
Bva04g00924 398 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 136 IPR044847 GO:0000976|GO:0006355|GO:0010158
Bva04g00924 398 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 183 398 - -
Bva04g00924 398 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 226 279 IPR006447 GO:0003677
Bva04g00924 398 SUPERFAMILY Homeodomain-like 223 280 IPR009057 -
Bva04g00924 398 Pfam Myb-like DNA-binding domain 227 278 IPR001005 -
Bva04g00924 398 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 136 - -
Bva04g00924 398 Gene3D - 225 282 - -
Bva04g00924 398 MobiDBLite consensus disorder prediction 23 45 - -
Bva04g00924 398 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00924 Bva-Chr4 6052330 6057568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00924 206 398 G2-like Transcription Factor Family AT5G16560 51.980 2.63e-47 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva04g00924 Myb_DNA-binding 1.3e-05 CL0123