Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00902 ATGCCTGTAATCCACAATACCTCTTGCTCTGCTAACCTTAACCCCTTATCTAATTTCAATCGAGTTCCCACATATCGGGCTCGACCCAATTCTTTTGAAATCTCAATTTCACCTCTAACCGTTAGGAGCTATGGATTGAGTGCCAgtgattctaattttttatataaaattggtCATTTCCAGAACCGAAGTTTCGGTTTTGCTCGGAGGAAGCATTCGCGTAGTGCAATCGTCAGAGCCGCTAGAACTGATTATTATTCCATTTTGAATGTTAGTAAGAATGCTTCATTACAAGAAATTAAGAGCGCTTACAGAACCCTAGCTCGTAAGTACCATCCAGACATGAACAAAAGCCCTGGGTCAGAAGAAAAGTTCAAGGAGATAAGTGCTGCATATGAGGTCCTATCAGATGATGAGAAAAGGTCTTTATATGATCGCTTTGGTGAGGCAGGTCTACGAGAAAATGGAGGTTTCGCTAGTGCTTCTGGGGTTGATCCTTTTGACGTGTTTGATACATTCTTTGGCGATTCGGATGGTCTATTTGGTGGTAGTGATGAACTAGGGGgcattaaattcaatttcagaAACAATAGAAAGCAGGATATTGATATTCGATATGACCTTCATTTGAGCTTtgaagaatcaatttttgGAGGACAGAGGAAAATTGAAGTTTCTTGCCTTCAGGCATGTAATAATTGTGATGGTACTGGAGCTAAATCAAGCAAATGCATTAAACAATGTTCAAATTGTGGTGGCAGAGGAGGAGAGATGAAAAGTCAGAGAACACCCTTTGGAATAATGTCTCTGGCTTCAACCTGCTCTAAGTGTGGTGGTCTTGGCAAGATAATCACTGATCACTGTCGAAGGTGTGGTGGTAGTGGTCAGGTGCAGTCTAAACGAATCATGGAAGTGACCATTCCTCCTGGTGTTGACAATGGAGCCATAATGCAAATTAAAGGAGAAGGGAATTTTGATCAGAAGAGGAGTCTAGCTGGTGATCTTTACGTAGTCCTCCATGTGGATGAGAAGGATGGGATTTGGCGAGGAGGTCttcatttatattcaaatatcaaTATCGACTTTACAGAGGCAATACTAGGATCAATGAAAAAGGTGGAAACTGTTGAAGGGTTAAAAGATCTCCAAATTCCTTCCGGGATTCAACCTGGAGATTCAGTGAAGTTGTCACGTTTGGGGGTTCCAGACATGAACAACCCATCTGTTCGAGGCCATCATTACTTCACTGTGAAAGTTCTTATCCCTAAAGATATCAGTGGTGCTGAGCGTGTACTTGTTGAGGAATTGGCTTCACTAAGAACATCTAGCAAAGatcatttcctttcttctaATCACATTGAGACATCTAAAGAGAAACCCAATGAATTCAGTAAGAGAAATGCAGAAAGCCATACGTCAAGCGCGGGAATCAAACATGATGAACCTCTATGGGAATCAATCAAGAACTTCTTGAGGGGAAGGAAATCTGAAGAAAGATTTGCGTCAATAAGCCTGCATACACCGACATTGCTGTGGAGATTTGGCAAGCCTAACCCGCTATTGCCAGATTattctttcacatttttcatTCTAACTTGTATTTTTGCCTCTATAGTAAAGTCTAATCACTCTCTAATTCAGAAAAGAATTCAGTCCTCTAAAGCTAGAacaacacaata 1679 0.3883 MPVIHNTSCSANLNPLSNFNRVPTYRARPNSFEISISPLTVRSYGLSASDSNFLYKIGHFQNRSFGFARRKHSRSAIVRAARTDYYSILNVSKNASLQEIKSAYRTLARKYHPDMNKSPGSEEKFKEISAAYEVLSDDEKRSLYDRFGEAGLRENGGFASASGVDPFDVFDTFFGDSDGLFGGSDELGGIKFNFRNNRKQDIDIRYDLHLSFEESIFGGQRKIEVSCLQACNNCDGTGAKSSKCIKQCSNCGGRGGEMKSQRTPFGIMSLASTCSKCGGLGKIITDHCRRCGGSGQVQSKRIMEVTIPPGVDNGAIMQIKGEGNFDQKRSLAGDLYVVLHVDEKDGIWRGGLHLYSNINIDFTEAILGSMKKVETVEGLKDLQIPSGIQPGDSVKLSRLGVPDMNNPSVRGHHYFTVKVLIPKDISGAERVLVEELASLRTSSKDHFLSSNHIETSKEKPNEFSKRNAESHTSSAGIKHDEPLWESIKNFLRGRKSEERFASISLHTPTLLWRFGKPNPLLPDYSFTFFILTCIFASIVKSNHSLIQKRIQSSKARTTQ 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00902 559 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 218 298 IPR036410 -
Bva04g00902 559 CDD DnaJ 84 137 IPR001623 -
Bva04g00902 559 SUPERFAMILY Chaperone J-domain 79 184 IPR036869 -
Bva04g00902 559 Gene3D DnaJ domain 80 183 IPR036869 -
Bva04g00902 559 CDD DnaJ_C 203 425 - -
Bva04g00902 559 Pfam DnaJ domain 84 145 IPR001623 -
Bva04g00902 559 SMART dnaj_3 83 140 IPR001623 -
Bva04g00902 559 PANTHER EXPRESSED PROTEIN 89 446 - -
Bva04g00902 559 Pfam DnaJ central domain 231 295 IPR001305 GO:0031072|GO:0051082
Bva04g00902 559 Pfam DnaJ C terminal domain 204 422 IPR002939 -
Bva04g00902 559 ProSitePatterns Nt-dnaJ domain signature. 125 144 IPR018253 -
Bva04g00902 559 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 89 446 - -
Bva04g00902 559 SUPERFAMILY HSP40/DnaJ peptide-binding domain 351 430 IPR008971 GO:0006457|GO:0051082
Bva04g00902 559 CDD DnaJ_zf 231 295 IPR001305 GO:0031072|GO:0051082
Bva04g00902 559 Gene3D - 345 454 - -
Bva04g00902 559 MobiDBLite consensus disorder prediction 455 476 - -
Bva04g00902 559 ProSiteProfiles dnaJ domain profile. 84 148 IPR001623 -
Bva04g00902 559 ProSiteProfiles Zinc finger CR-type profile. 218 300 IPR001305 GO:0031072|GO:0051082
Bva04g00902 559 SUPERFAMILY HSP40/DnaJ peptide-binding domain 203 341 IPR008971 GO:0006457|GO:0051082
Bva04g00902 559 PRINTS DnaJ domain signature 104 119 IPR001623 -
Bva04g00902 559 PRINTS DnaJ domain signature 120 140 IPR001623 -
Bva04g00902 559 PRINTS DnaJ domain signature 140 159 IPR001623 -
Bva04g00902 559 PRINTS DnaJ domain signature 86 104 IPR001623 -
Bva04g00902 559 Gene3D - 203 337 - -
Bva04g00902 559 Hamap Chaperone protein DnaJ [dnaJ]. 81 490 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Bva04g00902 559 Gene3D - 231 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00902 Bva-Chr4 5949080 5955098 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00902 79 145 C2H2 Transcription Factor Family AT1G74250 42.466 3.89e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00902 K03686 - gmx:100782135 679.478