Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00901 ATGCTGCTTCCGAAACTCCCCATCTTGCTTCCCCTCTTGCTCATTCTGCTTCCTTTAGTCAAACCAGATCTGGGTTCTGAGCGAGCTGCTCTCTTGGCTCTCCGTTCGGCGGTGGGTGGCCGAACCCTGCTCTGGAACGTTACAGAGCGGAGTCATTGCAAGTGGGCTGGTGTCCAATGCGAGAAGGATCGTGTCGTTGAACTTCATCTTCCTGGTGTAGCGCTTTCAGGCCGATTACCCACTGGCATTTTCGGCAACTTGACTCAGCTGCGCACTCTCAGCCTTCGTGTTAATGCCTTAACTGGTGGGTTGCCTTCAGATCTCGCTTCTTGCGTCAATCTTCGCAACCTTTACTTGcagcaaaatttattttctgggGAAATTCCAGACCTTTTGTTTAGTCTACCCGATTTGGTTCGGCTTAATTTGGCGTCCAACAATTTTTCCGGTGAGATTCCACCGGTTTTCAACAAATTGGTAAGGTTGAAGACTCTTTTACTGGAAAATAACAAGCTTTCCGGTTCCATCCCTAAATTGGACGTGCTAAAGCTTGAGCAATTCAATGTTTCGAACAATTTGCTAAATGGGTCAGTGCCAGAAAAGTTACAAACTTTTTCTCAAGACTCATTCCTGGGCAATTCGCTGTGTGGGAAGCCCCTACATGATCTTTGTCCTGGAGATAATGGAACTCCTACAGCGGGTGGGATTGAAACCAATGAGGgaaacaacaagaagaaattgtcTGGTGGTGCCATTGCCGGGATCGTTGTTGGATCAGTGGTGTGTCTTTTGATCattctatttgttttgattcttCTGTGCAGAAAGAAGAGCGACAAGAAGACCCGCTCCGTTGACATTGCAGCTGTGAAGCAACCAGAAGTGGAAATTCCGGGTGAGAAACCTGTCTCTGATGTGGAGAATGGTGGTGGTGGTCACAGTAACGGGTATTCGGTGGCTGCAGCGGCGGCGGCAGCAATGACAGGAAATGGCAAAGCGGAAACTAACAGTACTGGCGCTAAGAAGTTGGCGTTCTTTGGTAATTCACCTAGGATTTTTGATCTCGAGGATTTGCTTAGAGCTTCGGCTGAGGTTTTAGGTAAAGGGATTTGTGGCACAGCCTACAAGGCTGTTTTGGAGAGTGGCCCTGTGGTGGCTGTGAAAAGGTTGAAGGATGTAACGATTTCTGAAAAGGAATTAAAGGAGAGAATTGAATCCGTGGGAGCAATGGATCATGAGAATTTGGTCCCTCTCAGGGCTTACTATTTTAGCAGGGATGAAAAGCTTCTTGTCTACGATTACATGCCCATGGGAAGCTTATCTGCTCTTTTGCATGGGAACAAAGGGGCAGGCAGAACCCCATTGAATTGGGAAACTAGATCAGGCATTGCACTTGGAGCTGCCCGTGGCATTGAGTACTTACATTCACAAGGCCCTAATGTTTCTCATGGAAACATAAAATCATCCAATATCCTCCTAACCAAATCCTATGAAGCCAGAGTGTCTGATTTTGGCGTGGCACACCTTGTTGGTCCCTCCTCAACTCCCAACCGGGTTGCTGGATACCGTGCACCCGAGGTAACTGACCCTCGCAAAGTTTCCCAGAAAGCAGATGTGTACAGCTTCGGAGTGTTACTCTTGGAACTTCTCACCGGAAAAGCTCCTACCCATGCTCTATTAAATGAGGAAGGAGTAGACCTCCCCAGATGGGTGCAATCCGTTGTAAGAGAAGAGTGGACATCTGAAGTTTTTGACCTTGAGCTCCTCAGGTACCAAAATGTTGAAGAGGAAATGGTTCAGCTGCTGCAACTTGCAGTAGATTGTGCAGCTCCATACCCTGATAAGCGCCCTTCAATGGCTGAAGTCACAAGACGCATTCAAGAGTTATGTCGTTCTAGTGTCAAAAAGGATCAAGACCAAATCAATGATATAGATGATATATCTTCATG 1949 0.4602 MLLPKLPILLPLLLILLPLVKPDLGSERAALLALRSAVGGRTLLWNVTERSHCKWAGVQCEKDRVVELHLPGVALSGRLPTGIFGNLTQLRTLSLRVNALTGGLPSDLASCVNLRNLYLQQNLFSGEIPDLLFSLPDLVRLNLASNNFSGEIPPVFNKLVRLKTLLLENNKLSGSIPKLDVLKLEQFNVSNNLLNGSVPEKLQTFSQDSFLGNSLCGKPLHDLCPGDNGTPTAGGIETNEGNNKKKLSGGAIAGIVVGSVVCLLIILFVLILLCRKKSDKKTRSVDIAAVKQPEVEIPGEKPVSDVENGGGGHSNGYSVAAAAAAAMTGNGKAETNSTGAKKLAFFGNSPRIFDLEDLLRASAEVLGKGICGTAYKAVLESGPVVAVKRLKDVTISEKELKERIESVGAMDHENLVPLRAYYFSRDEKLLVYDYMPMGSLSALLHGNKGAGRTPLNWETRSGIALGAARGIEYLHSQGPNVSHGNIKSSNILLTKSYEARVSDFGVAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAPYPDKRPSMAEVTRRIQELCRSSVKKDQDQINDIDDISS 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00901 649 Gene3D Ribonuclease Inhibitor 26 135 IPR032675 -
Bva04g00901 649 ProSiteProfiles Leucine-rich repeat profile. 161 183 IPR001611 GO:0005515
Bva04g00901 649 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 10 649 - -
Bva04g00901 649 Gene3D Ribonuclease Inhibitor 138 221 IPR032675 -
Bva04g00901 649 Pfam Protein kinase domain 363 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00901 649 PANTHER OS05G0588300 PROTEIN 10 649 - -
Bva04g00901 649 Gene3D Phosphorylase Kinase; domain 1 326 434 - -
Bva04g00901 649 SUPERFAMILY Protein kinase-like (PK-like) 364 625 IPR011009 -
Bva04g00901 649 ProSiteProfiles Protein kinase domain profile. 360 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00901 649 Gene3D Transferase(Phosphotransferase) domain 1 435 648 - -
Bva04g00901 649 Pfam Leucine rich repeat N-terminal domain 26 60 IPR013210 -
Bva04g00901 649 SUPERFAMILY L domain-like 45 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00901 Bva-Chr4 5941250 5944266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00901 23 645 Receptor kinase-like Gene Family AT1G48480 65.881 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva04g00901 Pkinase 4.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00901 - - pavi:110746300 950.273