Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00900 ATGGTGTTCAAAGGTAGGTTCTTCTCCTCTAAGAAATCCGATACTTCCAGCCCCGATGGATCGTCCAGTAGCCCGCGATCATTCGGGTCCAATTCCCCCAGCAGATCCGAGAAGAAGAAGGCTAAATCAACTTCCAAAGAAGCCCAGACTGCTAACACCAACTCTGGTGGTGTCATTGGCAGCGGTTTCAGTGCCGCGCCAAGCCGTCAAATGCAAGTGAAAGATGGTGCGAAGAAGAAGGACGTGAAAGACAAAGAAAGTCAAACTTCAACTGAGTCTCGTTTCATGCCATCCAAGCCAAATTCAGGCGGGGTACTGAGTTCTGGGTCCAAGCCAAAGAAGCTGGAGGCTGCGGCGGCGGACGGCAAGGACTCGCCGTCGTCCTCGTTTTCGCCAATTTTGGCATCATCCcttaaattgaataagattaaGACGAGATCAGGGCCACTTCCCCAGGAGAGCTTTTTTGGGTTTAGGAATGACAGGGGGTCGTCACTTGGTGCTAGTAACCTCTCACGGCCTGGTGGTGATGGCAGCTCGGGTTCGGGAAGTGGGGGTAAGAAGAAGGAGTTGGTGAATCAGAGCAAAGTTGGGTTTCAAGAGAGCATTAGCAGCGGAACTTGGGTTGATAATGGGAGCAATTCGGATGGAATGTCAACTGGGAGTGCACCTTCCAGGGACCAGAGCCCCAATATATTGGCACGGTCGCGGCTACAGAATGCCGAGTCATCCGCCGAAGCAGGGAGGCAAGAACCGTCCTGGGCACAGTCTGGAGGCTTAAGGAGTTCAGATGTTTGCACGCCAGAGGAGTCTGAATCTCCTCGTTTTCAAGCTATACTACGTGTCACAAGTGCACCCAGAAAGAGGTTTCCTGGTGACATTAAGAGTTTTTCTCATGAATTGAATTCTAAAGGCGTCGGACCTTTTCCATTTTGGAAGCCTCGACGGTCAAATAACTTAGAGGAGATCCTGGTTGTTATTCGGGGAAAATTTGATAAAGCAAAGGAAGAAGTGAACTCTGAATTGGCTGTTTTTGCTGCAGATCTGGTTGGGgttcttgaaaaaaattcagataCTCATCCTGAGTGGCAAGAGAGAATTGAGGATTTGCTAATTTTGGCTAGGAGTTGTGCTATGGCTTCACCTGGGGAATTTTGGCTTCAGTGTGAAGGCATAGTTCAGGAGTTGGATGATAGGCGTCAATATCTTCCTCCAGGGATTTTGAAGCAGCTTATCACCAAAATGCTTTTCATTCTCACAAGGTGTACCAGATTGGTTCAGTTCCACAAGGAAAGCGGTTTGGCCGAGGATGAGCATGTTTTTAATCTCCGTCAATCTAGAGTCTTGCATTCTGCTGACAAACGGATTCCTCCTGGTGTGGGAAGGGAAGCAAAAAGTGCAAGCACTGCAAAGGCTTCAAGGGCAACAACCAAAAAATCTTATAGTCAGGAGCAGCATAGCTTGTACCAGAAGAGAGATGAAGTAATGCCGGCAGAGAATACTTCACTTCCTGCTGATTACAGTTCAAAAAACTTGGATTCTTCCTCAGACAGATATAGGATGGCTTCTTGGAGGAAATTCTCATCTCCGGCAAAAAGCCCAAAAGAAGCTGCTCAGTCGAAGGACCAGAGTTATAGGAAAGTTGAACCTTCTAAGATATCCAACAGTAAACAAACAACTTCTGATGTTGATCCAACTTCTGCTAAGCCATCTAACCTTCTTATCAAAGATTCTCAGGAACATGCTTCCAAGCACCATCATAAAGTTTCCTGGGGTTACTGGGGTGATCAACAGCATGTTGAGGAGTGTTCAATAATCTGTCGTATATGTGAGGAGGAAGTTCCTACTCTACATGTCGAAGAACATTCCAGGATTTGCACACTCGCTGATAGATGTGATCAGAAGGGTCTGAGTGTCAATGAGCGCCTTTCCAGAATTGCTGAAACTCTAGAAAAGATGATGGAATCATGTGCTCAGAAGGATGTCCAACATGTAGTGGGAAGTCCTGATGTTGCAAAAGTATCAAATTCAAGTATGACTGAAGAATCTGATGTGCTCTCTCCAAAACTTAGTGATTGGTCTCGGAGAGGCTCAGAGGATATGTTAGACTGTTTCCCTGAAGCTGATAACTCAGTTTTCATGGACGACCTAAAGGGATTGCCTCTGATATCATGTAAAACTCGTTTTGGTCCAAAGTCTGACCAGGGTATGACAACATCATCTGGAGGGAGCATGACTCCTAGATCTCCTTTATTGACACCAAGGACAAGTCAGATTGACTTCCTCTTGGGTGGGAAAGGTGCTTATTCCGAACATGATGATCTTCCACTGATGAATGAACTTGCTGATATAGCGCGATGTGTAGCCAATGCACCTCTGGATGATGATCACTCAGCttcatatttattaacttGTCTTGATGACTTGCGGGTTGTTGTAGACCGGAGGAAATTTGACGCGCTTTCTGTGGAAACTTTTGGAACACGCCTTGAGAAGCTAATAAGGGAGAAGTATTTGCAGCTTTGTGAGATGGTGGAAGATGAAAAGATAGATATAACAAGCACTGTAATTGATGAAGATGCTCCTTTGGAAGATGATGTGGTTCGTAGCTTGAGAACAAGCCCTATCCATTCTTCTTCTAAGGATCGAACTTCTATAGATGACTTCGAGATTATAAAGCCTATCAGTCGTGGAGCATTTGGACGGGTTTTCTTGGCTAAAAAGAGGACAACTGGGGACCTTTTTGCTATAAAGGTTCTCAAGAAGGCAGACATGATCCGTAAGAATGCAGTAGAAAGTATTTTAGCGGAACGTGATATCTTAATTACAGTGCGCAATCCTTTTGTGGTTCGtttcttctattctttcaCAGATAGAATGAACTTGTATCTTGTTATGGAGTATCTTAATGGAGGCGACCTGTATTCcttattaagaaatttgggTTGTCTAGACGAAGAAGTTGCTCGTGTATATATTGCTGAAGTGGTACTTGCTTTGGAATATTTACATTCACTCCACGTGGTTCATCGTGACTTGAAGCCTGACAATTTGTTGATTGCACATGATGGTCACATTAAGTTGACAGATTTTGGGCTTTCAAAAGTTGGTCTCATCAACAGCACTGATGATTTGTCTGGTCCAGCTGTGAGTGGGACATCCCTACTTGTGGAGGATGATCCTCAGTTATCTACATCTGAACATCAAAgagaaaggaggaagaaacGTTCTGCAGTGGGTACACCTGATTATTTGGCACCAGAAATACTTTTGGGAACTAGCCATGGGTATACTGCTGATTGGTGGTCTGTTGGTGTCATTTTATTCGAATTGCTTGTTGGCATTCCACCCTTCAATGCAGAGCATCCTCAGattatatttgataatattcttAACCGTAATATACCTTGGCCCCGGGTACCTGAAGAAATGAGCCCTGAAGCACAAGATCTTATTGATCGGTTGTTGACTGAAGATCCTACTCAGAGACTTGGAGCCCAAGGTGCATCGGAGGTGAAGCAACATGTTTTCTTCAAGGATATAAACTGGGACACACTTGCCAGGCAGAAGGCTGCATTCATTCCTGCTTCTGAGAGTGCTCTAGATACTAGTTATTTCACAAGTCGCTATTCATGGAATACTTCTGATGGCCTTGTATATCCAGCAAGTGATGTTGAGGATTCTAGTGATGCTGACAGCTTAAGTGGCAGCAGTAGTTGCCTGAGTAATCGCCAAGATGAAGTGGGAGATGAATGTGGGGGTCTTGCTGAATTTGAATCTGGTTCATCTgtcaattattcttttagtaaTTTCTCCTTTAAGAATCTCTCCCAGCTTGCATCTATCAACTATGATCTGCTGACCAAGGGAATTGGTTTGACTCATGATTTGGGGAATTTTGGGGGCATAAACACCCTTGTCGTTTGTATACCTTGTACATATATTTA 3947 0.4348 MVFKGRFFSSKKSDTSSPDGSSSSPRSFGSNSPSRSEKKKAKSTSKEAQTANTNSGGVIGSGFSAAPSRQMQVKDGAKKKDVKDKESQTSTESRFMPSKPNSGGVLSSGSKPKKLEAAAADGKDSPSSSFSPILASSLKLNKIKTRSGPLPQESFFGFRNDRGSSLGASNLSRPGGDGSSGSGSGGKKKELVNQSKVGFQESISSGTWVDNGSNSDGMSTGSAPSRDQSPNILARSRLQNAESSAEAGRQEPSWAQSGGLRSSDVCTPEESESPRFQAILRVTSAPRKRFPGDIKSFSHELNSKGVGPFPFWKPRRSNNLEEILVVIRGKFDKAKEEVNSELAVFAADLVGVLEKNSDTHPEWQERIEDLLILARSCAMASPGEFWLQCEGIVQELDDRRQYLPPGILKQLITKMLFILTRCTRLVQFHKESGLAEDEHVFNLRQSRVLHSADKRIPPGVGREAKSASTAKASRATTKKSYSQEQHSLYQKRDEVMPAENTSLPADYSSKNLDSSSDRYRMASWRKFSSPAKSPKEAAQSKDQSYRKVEPSKISNSKQTTSDVDPTSAKPSNLLIKDSQEHASKHHHKVSWGYWGDQQHVEECSIICRICEEEVPTLHVEEHSRICTLADRCDQKGLSVNERLSRIAETLEKMMESCAQKDVQHVVGSPDVAKVSNSSMTEESDVLSPKLSDWSRRGSEDMLDCFPEADNSVFMDDLKGLPLISCKTRFGPKSDQGMTTSSGGSMTPRSPLLTPRTSQIDFLLGGKGAYSEHDDLPLMNELADIARCVANAPLDDDHSASYLLTCLDDLRVVVDRRKFDALSVETFGTRLEKLIREKYLQLCEMVEDEKIDITSTVIDEDAPLEDDVVRSLRTSPIHSSSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTDRMNLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLHVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTSLLVEDDPQLSTSEHQRERRKKRSAVGTPDYLAPEILLGTSHGYTADWWSVGVILFELLVGIPPFNAEHPQIIFDNILNRNIPWPRVPEEMSPEAQDLIDRLLTEDPTQRLGAQGASEVKQHVFFKDINWDTLARQKAAFIPASESALDTSYFTSRYSWNTSDGLVYPASDVEDSSDADSLSGSSSCLSNRQDEVGDECGGLAEFESGSSVNYSFSNFSFKNLSQLASINYDLLTKGIGLTHDLGNFGGINTLVVCIPCTYI 1315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00900 1315 MobiDBLite consensus disorder prediction 73 90 - -
Bva04g00900 1315 ProSiteProfiles Protein kinase domain profile. 889 1178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00900 1315 MobiDBLite consensus disorder prediction 731 750 - -
Bva04g00900 1315 MobiDBLite consensus disorder prediction 469 484 - -
Bva04g00900 1315 Coils Coil 640 660 - -
Bva04g00900 1315 MobiDBLite consensus disorder prediction 452 514 - -
Bva04g00900 1315 MobiDBLite consensus disorder prediction 9 32 - -
Bva04g00900 1315 PANTHER SERINE/THREONINE-PROTEIN KINASE 26 1289 - -
Bva04g00900 1315 MobiDBLite consensus disorder prediction 195 270 - -
Bva04g00900 1315 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1008 1020 IPR008271 GO:0004672|GO:0006468
Bva04g00900 1315 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 26 1289 - -
Bva04g00900 1315 MobiDBLite consensus disorder prediction 549 571 - -
Bva04g00900 1315 MobiDBLite consensus disorder prediction 46 68 - -
Bva04g00900 1315 SUPERFAMILY Protein kinase-like (PK-like) 886 1217 IPR011009 -
Bva04g00900 1315 Pfam Protein kinase domain 889 1178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00900 1315 Gene3D Phosphorylase Kinase; domain 1 887 1207 - -
Bva04g00900 1315 MobiDBLite consensus disorder prediction 91 108 - -
Bva04g00900 1315 ProSiteProfiles AGC-kinase C-terminal domain profile. 1179 1283 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bva04g00900 1315 SMART serkin_6 889 1178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00900 1315 MobiDBLite consensus disorder prediction 1063 1078 - -
Bva04g00900 1315 MobiDBLite consensus disorder prediction 1 272 - -
Bva04g00900 1315 MobiDBLite consensus disorder prediction 124 143 - -
Bva04g00900 1315 MobiDBLite consensus disorder prediction 163 179 - -
Bva04g00900 1315 CDD STKc_MAST_like 895 1183 - -
Bva04g00900 1315 MobiDBLite consensus disorder prediction 1052 1078 - -
Bva04g00900 1315 MobiDBLite consensus disorder prediction 526 571 - -
Bva04g00900 1315 Gene3D Transferase(Phosphotransferase) domain 1 973 1196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00900 Bva-Chr4 5922096 5938595 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00900 1 1290 AGC Kinase Gene Family AT3G17850 67.199 0.0 1629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Bva04g00900 Pkinase 7.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00900 - - gmx:100776995 1867.05