Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00899 ATGCAGTCGTCATTATCAAACAAAGTCTCTGGGGTTCCTCAATTGCTGTCCTTTAAGGCCCCTCAGGAAGatagaccaaggaagagtaTTGCCGATCCAGTAGCATCGTCGGGATATATGACCATATCAACCACTGATGTTTTTGACTCCAGCAATATCAAACCATTCTTGGGCATTATGCAGAAAAATATCAGTATAACAAAGCAAGGAGGGATGACAGTGTATCCTAATCCCATGCAACATATGAGTGGACATTCAGCATGCCCACAGGCTCAAGAAGCAAGAATATTTGCATTGTCAAagcaatcaaatcaaatgactAGGCCGGTTCTCCAATCTAATCTTGTTTCCAGTGACCATCATATGGTCAATCCTGCCATTAAACCACGATCTGTTGGAGGAGTCCAACTCATAACACCTGCACCTGTTCCTCCATCTAGAGGTTCAGGCTCCATTGTTGGCACCACTGACTTGAGGAATTCTTCCAAATCTTCTGGCGCACCTGCTCAGCTGACCATTTTCTATGCTGGCTCAGTGAGTGTGTATGATGACATAACTCCCGAGAAGGCTGAAGCTATCATGTTACTGGCTGGAAATGGGCCTCTTTCAAATCAGAACAAGACAGTTTCCTCATCTCAAGTTCAAACACCAATCTGTGTGCCCTCCAAAGATGATGCTTTTATTATAAGCCAATCCTATCCTTCATCCCAACCTCGCCATCTTCCTGGGAGAGGATCTTCTACCGGCAGTGAAGTCACAATAATGACACCAGTAACATCGTCAGTTACCATTAGTAAACTGATAGAGTCCCCCAAACCAGTGGCAGTCGGTTCTGCAGCTACAAAAATGGTTCCATCAGGTTTGCCTCAGGCACGGAAGGCATCCTTGGCTCGGTTTTTAGAGAAGCGCAAGGAAAGGGCGTTGAGCGTCTCACCGTACTCCATGAACACGAAGACTGGATCTGATGGTGTTAGTTTCTCTCTCAACTCTCCTGATTCCTTTCCTCTACGAGCCATCTA 1019 0.4426 MQSSLSNKVSGVPQLLSFKAPQEDRPRKSIADPVASSGYMTISTTDVFDSSNIKPFLGIMQKNISITKQGGMTVYPNPMQHMSGHSACPQAQEARIFALSKQSNQMTRPVLQSNLVSSDHHMVNPAIKPRSVGGVQLITPAPVPPSRGSGSIVGTTDLRNSSKSSGAPAQLTIFYAGSVSVYDDITPEKAEAIMLLAGNGPLSNQNKTVSSSQVQTPICVPSKDDAFIISQSYPSSQPRHLPGRGSSTGSEVTIMTPVTSSVTISKLIESPKPVAVGSAATKMVPSGLPQARKASLARFLEKRKERALSVSPYSMNTKTGSDGVSFSLNSPDSFPLRAI 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00899 339 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 236 IPR040390 -
Bva04g00899 339 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 241 331 IPR040390 -
Bva04g00899 339 Pfam tify domain 166 198 IPR010399 -
Bva04g00899 339 Pfam Jas motif 289 314 IPR018467 -
Bva04g00899 339 ProSiteProfiles Tify domain profile. 164 199 IPR010399 -
Bva04g00899 339 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 1 236 - -
Bva04g00899 339 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 241 331 - -
Bva04g00899 339 SMART tify_2 164 199 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00899 Bva-Chr4 5916686 5918292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00899 1 322 Tify Gene Family AT3G17860 38.529 2.27e-44 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Bva04g00899 tify 1.8e-17 No_clan