Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00898 ATGGCTTGGCTAGATAGGAATGAAAGCTCTGAGTTTGAGAGCCTATTGGACACGGGCAATCGAGGAACTGCAAAAAATACTAAGCAAATGGAACCCCTGATATCAATTTTTGGCCGTGTACTTGAATTCAGTAACCTCTCATACAGTGTCATGaagaaacagaagaagaatGGAGTTCCAAATTTTTGgatcaagaaagaaacatatttTCTTCATGACATCTCTGGCGAGGCAATGAGAGGTGAACTTATGGCAATCACGGGGCCTGGTGATGCTGGCGAATCGACCCTTCTTGATGCGTTGGCTGGGCGTATTGCACAAGGGAGTCTAAAACGATCAGTCAGAATTGATGGAAAGCCAGTGACGGCAAATTACATGAGGATGGTGTCGTCATATGTGATGCAAGATGATCACCTCTTCCCTATGTTGACAGTTTTTGAGACATTTATGTTTGCAGCTGAGCTTAGACTTCCCCCTTGCCTTTCAAGGGAGGACAAGAAGAAGAGGGTTCATCAGCTCATTGACCAACTGGTGTGCaacacacatacatacattGGTGGAGAGGGGAGGAGAGGAGCGTCAAAAGGCGCGCGACGAAGAGTCTCAATTGGCATAAACATCATCCGTAATCCACCACTTCTGTTTCTTGATGAACCAACCTCAGGTCTTGATTCTACCAGTGCTTACAGTATGGTGGAAAAGGTTAAGGACATAGCTCGACGTAGCACCATCGTCCTTATGACTATACATCATCCTTCACATAGAATTCAACTGCTCCTGGACCGTGTCACCATCCTAGCAAGGGGAAGATTGATATACATGGGAAGACCAGGTGCACTTGGTGATCACCTTTCTAGACTTGGAAGGCCAGTTCCAGATGGAGAAAACAGTGCTGATTATCTGCTAGAAGTCATAAAAGAATATGATGAATCAATAGTTGGGATAGAACCCCTTGCGTTGTACCAACTTGATAGCAAACCTGATCCTGAACAgtttgattctgattatgAGAATTTTGATAGCTCTTTAGACAGGAGAGCTAGGAATAGGGATGGTAGTTACCCCCCTCGTTTAGCTTCTCAGTTCTACAAAGATTTCTGTGTCTGGCTATACGAGGATGAGGTGGGAACTCCTCATTACCCACAACCTGGGATTCCAACTAGAACTCCAGGATGGACACCAGGAAAAACACCAGTTTCAGGAGCAAGAAGTGTAATTTCTGACCCATATTCTGCATCTTATCAGGAACCTTATCGCCCAGAAACCCATGGTAATGAGAATGTAAGTCAATCTATGGAGTCCTCCTATCCAGCTTCTTATGAAGCCTTTGAGATTGAAGTAGTCGTTTATGAGCCACCCCTTGGATTCAAGTTTGCAAACCCATGGATTTGTGAGGTTGTCATCCTCTCTTGGCGAACAGCTCTCAATGTATTCCGCACACCAGAACTCTTCCTCTACCGTGAGATTGTGCTTGCTGTTATGGCACTTGTTCTGTCCATGCTATTCAAGCATCTGGGTGATCCTACTTTGAAAGACACCAATAGGCTTCTCAACTTCTACATCTTTTCACTGTTCATTGTGTTCTTTTCCTCCAATGATGCTGTCCCAACTTTCATACTAGAAAGGTTCATCTTCATCAGAGAGACTTCCAACAATGCTTATCGTGCTTCTTCTTACGCCATTTCTTCCCTCGTTGCCTATCTCCCGTTTTTCGCCATTCAAGGTTTCACATTTGCTGCCATAACCAAAGGAATGCTCCACCTCAAAGGAAGTCTGTTCTACTTCTGGATGATCCTTTTTGCTTCACTGATTACTAGCAATTCTTATGCTTTGCTTGTTGGCGCACTTGTCCCAAGTTTCATTACAGGGTATGCAGTAAGCACAGCCATAATGGCTCTCTTCTTTCTGACTTGTGGCTTCTTCCTCAAGCAAACCCAGATACCCATCTCCTGGAAGTGGCTCCACTATATTTCTGCAATCAAATACCCATTCGAGGCATTGCTGAtaaatgaattcaagaatgatGAGTGCCACACAGGGAACCCTACAAATTTATCTCCTGGACCATTAGGAGAAGCGAAGTTCGTTGCCGACCATAATGTGTCAAATGATTGCTTGATAAGAGAAGATGTTTTGTCCTCAATGGATCTTCAAATGGAAAACATATGGCATGACGTCTTAATCCTGCTGGCCTGGGGTGTTCTTTACAggttctttttctatttggttTTGAGATTTTACTCCAAGAACGagagaaaatg 2261 0.4219 MAWLDRNESSEFESLLDTGNRGTAKNTKQMEPLISIFGRVLEFSNLSYSVMKKQKKNGVPNFWIKKETYFLHDISGEAMRGELMAITGPGDAGESTLLDALAGRIAQGSLKRSVRIDGKPVTANYMRMVSSYVMQDDHLFPMLTVFETFMFAAELRLPPCLSREDKKKRVHQLIDQLVCNTHTYIGGEGRRGASKGARRRVSIGINIIRNPPLLFLDEPTSGLDSTSAYSMVEKVKDIARRSTIVLMTIHHPSHRIQLLLDRVTILARGRLIYMGRPGALGDHLSRLGRPVPDGENSADYLLEVIKEYDESIVGIEPLALYQLDSKPDPEQFDSDYENFDSSLDRRARNRDGSYPPRLASQFYKDFCVWLYEDEVGTPHYPQPGIPTRTPGWTPGKTPVSGARSVISDPYSASYQEPYRPETHGNENVSQSMESSYPASYEAFEIEVVVYEPPLGFKFANPWICEVVILSWRTALNVFRTPELFLYREIVLAVMALVLSMLFKHLGDPTLKDTNRLLNFYIFSLFIVFFSSNDAVPTFILERFIFIRETSNNAYRASSYAISSLVAYLPFFAIQGFTFAAITKGMLHLKGSLFYFWMILFASLITSNSYALLVGALVPSFITGYAVSTAIMALFFLTCGFFLKQTQIPISWKWLHYISAIKYPFEALLINEFKNDECHTGNPTNLSPGPLGEAKFVADHNVSNDCLIREDVLSSMDLQMENIWHDVLILLAWGVLYRFFFYLVLRFYSKNERK 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00898 753 MobiDBLite consensus disorder prediction 330 354 - -
Bva04g00898 753 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 331 747 - -
Bva04g00898 753 SMART AAA_5 80 278 IPR003593 -
Bva04g00898 753 Pfam ABC-2 type transporter 466 672 IPR013525 GO:0016020|GO:0140359
Bva04g00898 753 PANTHER ABC TRANSPORTER 331 747 - -
Bva04g00898 753 MobiDBLite consensus disorder prediction 1 24 - -
Bva04g00898 753 Pfam ABC transporter 71 221 IPR003439 GO:0005524
Bva04g00898 753 Gene3D - 40 286 IPR027417 -
Bva04g00898 753 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 8 328 - -
Bva04g00898 753 MobiDBLite consensus disorder prediction 330 352 - -
Bva04g00898 753 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 41 293 IPR003439 GO:0005524
Bva04g00898 753 PANTHER ABC TRANSPORTER 8 328 - -
Bva04g00898 753 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 284 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00898 Bva-Chr4 5912970 5915914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00898 65 294 Calmodulin-binding Proteins AT2G36910 26.068 7.11e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00898 K05681 - gmx:100819497 940.643