Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00889 atgtCAACACAGTATGACAAGTTCTCTAAGGATTTTGTGATGGGAGGAGTGGCAGCTATCATGTCAAAGACTGCAGCTGCACCAATCGAGAGAGTGAAACTTTTATTACAAAACCAAGGAGAAATGATAAAGAGAGGACAACTCAAGAAACCATATCTGGGCGTAGCTGATGGCTTTAAGAGGGTCTTCAGGGAGGAGGGTCTTTTTGCCTTTTGGAGAGGTCATCAGGCCAATGTTATTCGATATTTCCCAACACAGGCTTTCAATTTTGCATTCAAAGGTTACTTCAAAAGCATTTTTGGGCGTTccagagagagagatgggTACATTAAGTGGTTTGCTGGAAATGTGGCTTCAGGCAGTGCTGCTGGAGCAACTACTTCACTTCTTCTGTATCATTTAGATTATGCACGTACACGATTGGGCACTGATTCAGGGGTGAGCCATGCTAATGGTCAGCGCCAGTTTAAGGGGCTAGTTGATGTGTACCGTAAAACCTTATCAAGTGATGGAGTTGTTGGTCTGTACAGGGGATTCGGGGTTTCAATAGTGGGAATCACCATGTACCGAGGCATGTACTTTGGGATCTATGACACCATGAAGCCCATTGTTTTAGTTGGCCCTTTTGAGggaaatttttttgctaGTTTCTTTTTAGGTTGGAGTATCACAACCTTTGCTGGGTTTTGTGCCTACCCGTTTGACACGCTGAGACGAAGAATGATGCTAACGTCTGGGCAGCCAATAAAGTATTGCAATGCAATGCATGCATTCAATGAGATCGTTAGGCATGAGGGCTTCCTTGCTCTATTTCGAGGAGTTACTGCAAATATGCTTCTTGGTGTAGCAGGGGCTGGGGTGCTTGCAGGATTTGATCAGCTGCACAGAATCTCATCTAGACATGGTTACCCTTATGATACCCAGAGAGTTTTAAAATG 938 0.4264 MSTQYDKFSKDFVMGGVAAIMSKTAAAPIERVKLLLQNQGEMIKRGQLKKPYLGVADGFKRVFREEGLFAFWRGHQANVIRYFPTQAFNFAFKGYFKSIFGRSRERDGYIKWFAGNVASGSAAGATTSLLLYHLDYARTRLGTDSGVSHANGQRQFKGLVDVYRKTLSSDGVVGLYRGFGVSIVGITMYRGMYFGIYDTMKPIVLVGPFEGNFFASFFLGWSITTFAGFCAYPFDTLRRRMMLTSGQPIKYCNAMHAFNEIVRHEGFLALFRGVTANMLLGVAGAGVLAGFDQLHRISSRHGYPYDTQRVLK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00889 312 SUPERFAMILY Mitochondrial carrier 6 293 IPR023395 -
Bva04g00889 312 Pfam Mitochondrial carrier protein 112 203 IPR018108 -
Bva04g00889 312 Pfam Mitochondrial carrier protein 7 102 IPR018108 -
Bva04g00889 312 Pfam Mitochondrial carrier protein 212 291 IPR018108 -
Bva04g00889 312 PRINTS Adenine nucleotide translocator signature 85 97 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bva04g00889 312 PRINTS Adenine nucleotide translocator signature 8 20 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bva04g00889 312 PRINTS Adenine nucleotide translocator signature 111 124 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bva04g00889 312 PRINTS Adenine nucleotide translocator signature 52 73 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bva04g00889 312 PRINTS Adenine nucleotide translocator signature 216 232 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bva04g00889 312 Gene3D Mitochondrial carrier domain 9 303 IPR023395 -
Bva04g00889 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 111 203 IPR018108 -
Bva04g00889 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 99 IPR018108 -
Bva04g00889 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 211 297 IPR018108 -
Bva04g00889 312 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 1 309 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bva04g00889 312 PANTHER ADP,ATP CARRIER PROTEIN ER-ANT1 1 309 - -
Bva04g00889 312 PRINTS Mitochondrial carrier protein signature 220 242 IPR002067 GO:0055085
Bva04g00889 312 PRINTS Mitochondrial carrier protein signature 126 144 IPR002067 GO:0055085
Bva04g00889 312 PRINTS Mitochondrial carrier protein signature 24 38 IPR002067 GO:0055085
Bva04g00889 312 PRINTS Mitochondrial carrier protein signature 74 94 IPR002067 GO:0055085
Bva04g00889 312 PRINTS Mitochondrial carrier protein signature 176 194 IPR002067 GO:0055085
Bva04g00889 312 PRINTS Mitochondrial carrier protein signature 11 24 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00889 Bva-Chr4 5856602 5859978 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00889 6 301 Antiporters AT5G17400 76.689 1.86e-167 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00889 K05863 - gmx:100798418 518.464