Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00883 ATGGAGAACTTGATTGGCCTTCTCAGAGTTCGCGTCAAGCGTGGCGTCAACCTCGCCGTTCGTGATGTTCGTAGCAGCGATCCATACGCCGTCGTAAAAATAGGAAAGCAGAAACTGAAGACTCGCTTTATTAGAAAGGATGTCAATCCTGAGTGGAATGAAGACCTCACACTTTCTATTATGGACCCTAATGTGCCAATCAAACTGATTGTATATGACCATGACACTTTCAGCAAAGATGACAAGATGGGAGATGCCGAGTTTGAAATCATATCATTCATGGAAGCCATGAAGATGAACTTAGAAGGCCTGCCAAGTGGCACTATAGTCAAAAGAATACTACCAAGCAGGCAAAACTGCTTGGCTGAGGAGAGCTGTATATCTTGGACTGGCGGCAAAGTCGTCCAAGATATGATCCTTAGATTGAGAAATGTTGAATGTGGTGAAGTGGAAATCCAACTGCACTGGATTGATGTCCCCGGTTCCAAGAGTATATA 497 0.4427 MENLIGLLRVRVKRGVNLAVRDVRSSDPYAVVKIGKQKLKTRFIRKDVNPEWNEDLTLSIMDPNVPIKLIVYDHDTFSKDDKMGDAEFEIISFMEAMKMNLEGLPSGTIVKRILPSRQNCLAEESCISWTGGKVVQDMILRLRNVECGEVEIQLHWIDVPGSKSI 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00883 165 CDD C2_ArfGAP 5 148 - -
Bva04g00883 165 Pfam C2 domain 6 92 IPR000008 -
Bva04g00883 165 Gene3D C2 domain 2 164 IPR035892 -
Bva04g00883 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Bva04g00883 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
Bva04g00883 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 100 IPR035892 -
Bva04g00883 165 SMART C2_3c 7 102 IPR000008 -
Bva04g00883 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00883 Bva-Chr4 5822131 5825067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00883 38 165 C2H2 Transcription Factor Family AT1G70790 59.231 6.38e-52 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00883 - - vvi:100261135 281.952