Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00872 ATGAAGAACATTCTTAAGAAGCTTCATATCATGCCTCATCAATCAGAAGATTCAGAAGGGTCTACTTCATCAAAAGGCAATAAGGCCAACAATGGTTCATCCCCTAAGAAGCTTTTGCAATCTAGGTCCCCTCAAAATTCTGATAATAAACCCTTTTCAGGGATTTCGAGTTGGTTGCATTCAGTTACTAATAGGCAGACTTCTAGTCCTCCTTCTTCAAACGTGACAAGAGGGGAAAGGACGGAACCATCTGATTCCGTGAGTAGTGGGGGTTTGGATATTGTTCCTGATTTGGCTAGGCGTGATTCAGGGTCTAGCACTTCGAGGGATCCTGAGATAGAGGAAGAGTATCAGATACAACTGGCTTTAGAGCTAAGTGCAAAGGAGGATCCAGAGGCTGTGCAGATTGAAGCTATTAAGCAGATCAGTTTGGGCTCTTGTGATCCGGATAATACACCAGCAGAAGTTGTGGCATACAGATACTGGAATTACAATGCTCTTAATTATGATGACAAGATCATGGATGGCTTCTATGATCTGTATGGAATCTTGATCGAGTCGACTTCCTCAAGAATGCCTTCCCTTGTAGATCTGCAAGGAACAACAATCTCAGATAATGTCACATGGGAAGCAGTCTTAGTCAATAGGGCTGGTGATTCCAATTTATTGAACCTTGAACAAAAGGCCCTAAGGCTGGCAGTCAATTCAAGACCTGATTTTGAAGTAGTTGTGGATAGTAATTTGGTGCAGATGCTTGCCAGATTAGTGGCTGACTACATGGGTGGACCAGTCAAAGATCCTGAAAGTATGTCAAGGGCATGGCGGAGTCTTAGTTACAGTCTGAAAGCAACCCTTGGTAGCATGGTTTTGCCCCTTGGTTCTCTTACCATTGGGATGGCTCGTCATCGTGCATTACTGTTTAAGgTTTTAGCTGATAGTGTGGGCATTCCGTGCCGGTTGGTGAAAGGACAGCAGTATACAGGTTCTGATGATGTGGCaatgaactttgtcaagttTGATGGTGGAAGgGAGTACATCGTTGACCTAATGGCTGATCCTGGAACACTCATCCCATCTGATGCAGCTGGATCACATATAGAGTATGATGAATCTTCATTTATGGCCAGTCCTTCATCAAGGGACATTGGTTCCTGTCATGTAGCATCATTGATCAGTGGGGTTGGAAGTTCATTTGAAGAAACGTCAACAGGGAAGGAGAATGATGTCAGAAGTGGTTTCCCTCCTCCAGAGCTAAGCAGGCCAACTACAGGCAGAGaagaattaaagataaattccCCCAGTTCTGAGAAGATCACGACCCAGGATGCTCCTAGTAGACCTATTTATTCATATGCACATGCAAGATCTCCTTCTTGGACTGAAGGGATCAGTTCACCTGCAGTACGTAGAATGAAAGTCAAAGATGTTTCACAATATATGATTGATGCCGCCAAAGAGAATCCTAACTTAGCTCAAAAACTTCATGATGTTTTACTTGAAAGTGGTGTTGTTGCTCCTCCAAACTTGTTTTCTGAAATTTATCATGAGCAGTTAGGtgcctcttcttcttctgagtTGAACTCCCTGactgaagaaaaagatgaacaTAAACAGGGAAGTGGACAGCAAGAAACTCAGGTTCATGATAATCAAGGTCCTGCTCAATTATTGCCTATTTTGCCTAACTACAGACTTAATCTGAAAGCAAGTCCTAGCAGTCAGCTAGAGCCTTCTAAGCCTGTAGAAGGTTTAGGGACCAACCTTCCTCTTGATACAAGGGAAGCATCTGGACAATGCACACCATCTCCACCAGAAGCAACTCCTGTAAAATATGGGAAAAATGTCcctgttgctgctgctgctgcagcAGCTGCTGTCGTTGTTGCATCTTCCATGGTAGCTGCTGCGGCAAAGTCAAACAATGACTCAAATATTGAACTTCCTGTAGCAGCTGCCGCTACTGCTACCGCTGCAGCTGTAGTAGCAACTACTGCTGCTGTCAATAAGCAATATGAGCAGGGCACAAGAAGCGATGGAGATATAGATGGCGCTGGTTATGAGGTGAAGGGAAGTGGTGACGGAGAGCATTCTGTTTTAGTAGCAAATTCGGAAGGGGAGAGGATATCAGATAGATCAGTAAGTAATGATAGTGTAAAATCTGAGTCAGCACTTGATGATGTTGCTGAGTATGAGATTCCTTGGGAGGAGATCACGCTGGGTGAGCGTATCGGACTTGGATCATATGGGGAGGTTTACCGTGGTGAATGGCGTGGAACAGAAGTTGCTGTAAAGAAGTTTCTAGACCAAGATATATCTGGTGAATCACTTGAAGAATTCAAAAGTGAGGTTCAAATAATGAAACGGCTCAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTAATTCGACCTCCAAATCTTTCTATTGTTACAGAGTTTCTTCCCAgAGGCAGTTTGTATAGGTTAATTCACCGGCCTAACAATCAATTAGATGAAAGAAGGCGCTTGAGGATTGCCCTTGATGCTGCTCGAGGAATGAACTATTTGCACAACTGCAGTCCAATGATAGTCCATCGTGATTTGAAGTCCCCAAATCTTCTTGTTGACAAAAACTGGGTTGTAAAGGTATGTGATTTTGGGTTATCACGGATGAAGAATAGtacatttctttcttccagATCGACTGCTGGCACGGCTGAGTGGATGGCTCCAGAAGTGTTAAGAAATGAACCTTCAAATGAAAAGTGTGATGTTTTTAGCTATGGCGTCATACTGTGGGAGCTCTCCACTTTGCAGCAACCGTGGGGAGGAATGAATCCAATGCAAGTAGTTGGTGCTGTGGGTTTCCAGCATCGTCGTCTCGACATTCCGGATAACGTGGACCCTGCCATTGCTGATATTATCAGGAAATGCTGGCAAACAGATCCAAAGTTGAGACCCTCATTTGCTGAAATCATGGCCGCGCTGAAGCCATTGCAGAAGCCAATTGCCAGTTCTCAAGTGCCTAGACCAAGTCCACAAGTCCGCGAAAGGGTTCAGTTGTCGCGGGAACCAGAAGACCCAGCAGAATA 3071 0.4272 MKNILKKLHIMPHQSEDSEGSTSSKGNKANNGSSPKKLLQSRSPQNSDNKPFSGISSWLHSVTNRQTSSPPSSNVTRGERTEPSDSVSSGGLDIVPDLARRDSGSSTSRDPEIEEEYQIQLALELSAKEDPEAVQIEAIKQISLGSCDPDNTPAEVVAYRYWNYNALNYDDKIMDGFYDLYGILIESTSSRMPSLVDLQGTTISDNVTWEAVLVNRAGDSNLLNLEQKALRLAVNSRPDFEVVVDSNLVQMLARLVADYMGGPVKDPESMSRAWRSLSYSLKATLGSMVLPLGSLTIGMARHRALLFKVLADSVGIPCRLVKGQQYTGSDDVAMNFVKFDGGREYIVDLMADPGTLIPSDAAGSHIEYDESSFMASPSSRDIGSCHVASLISGVGSSFEETSTGKENDVRSGFPPPELSRPTTGREELKINSPSSEKITTQDAPSRPIYSYAHARSPSWTEGISSPAVRRMKVKDVSQYMIDAAKENPNLAQKLHDVLLESGVVAPPNLFSEIYHEQLGASSSSELNSLTEEKDEHKQGSGQQETQVHDNQGPAQLLPILPNYRLNLKASPSSQLEPSKPVEGLGTNLPLDTREASGQCTPSPPEATPVKYGKNVPVAAAAAAAAVVVASSMVAAAAKSNNDSNIELPVAAAATATAAAVVATTAAVNKQYEQGTRSDGDIDGAGYEVKGSGDGEHSVLVANSEGERISDRSVSNDSVKSESALDDVAEYEIPWEEITLGERIGLGSYGEVYRGEWRGTEVAVKKFLDQDISGESLEEFKSEVQIMKRLRHPNVVLFMGAVIRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRIALDAARGMNYLHNCSPMIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKNSTFLSSRSTAGTAEWMAPEVLRNEPSNEKCDVFSYGVILWELSTLQQPWGGMNPMQVVGAVGFQHRRLDIPDNVDPAIADIIRKCWQTDPKLRPSFAEIMAALKPLQKPIASSQVPRPSPQVRERVQLSREPEDPAE 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00872 1023 MobiDBLite consensus disorder prediction 570 607 - -
Bva04g00872 1023 MobiDBLite consensus disorder prediction 1 115 - -
Bva04g00872 1023 MobiDBLite consensus disorder prediction 15 88 - -
Bva04g00872 1023 MobiDBLite consensus disorder prediction 528 542 - -
Bva04g00872 1023 Pfam Ethylene-responsive protein kinase Le-CTR1 154 357 - -
Bva04g00872 1023 MobiDBLite consensus disorder prediction 521 549 - -
Bva04g00872 1023 MobiDBLite consensus disorder prediction 397 444 - -
Bva04g00872 1023 ProSitePatterns Protein kinases ATP-binding region signature. 743 765 IPR017441 GO:0005524
Bva04g00872 1023 ProSiteProfiles Protein kinase domain profile. 737 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00872 1023 Pfam Protein tyrosine and serine/threonine kinase 737 989 IPR001245 GO:0004672|GO:0006468
Bva04g00872 1023 Gene3D Transferase(Phosphotransferase) domain 1 816 1000 - -
Bva04g00872 1023 SUPERFAMILY Protein kinase-like (PK-like) 719 987 IPR011009 -
Bva04g00872 1023 CDD STKc_MAP3K-like 743 989 - -
Bva04g00872 1023 MobiDBLite consensus disorder prediction 994 1023 - -
Bva04g00872 1023 Gene3D Phosphorylase Kinase; domain 1 730 814 - -
Bva04g00872 1023 SMART serkin_6 737 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00872 1023 ProSitePatterns Serine/Threonine protein kinases active-site signature. 856 868 IPR008271 GO:0004672|GO:0006468
Bva04g00872 1023 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 1009 - -
Bva04g00872 1023 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 1009 - -
Bva04g00872 1023 MobiDBLite consensus disorder prediction 425 444 - -
Bva04g00872 1023 PRINTS Tyrosine kinase catalytic domain signature 811 824 IPR001245 GO:0004672|GO:0006468
Bva04g00872 1023 PRINTS Tyrosine kinase catalytic domain signature 916 938 IPR001245 GO:0004672|GO:0006468
Bva04g00872 1023 PRINTS Tyrosine kinase catalytic domain signature 850 868 IPR001245 GO:0004672|GO:0006468
Bva04g00872 1023 PRINTS Tyrosine kinase catalytic domain signature 897 907 IPR001245 GO:0004672|GO:0006468
Bva04g00872 1023 PRINTS Tyrosine kinase catalytic domain signature 960 982 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00872 Bva-Chr4 5732304 5740487 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00872 1 1006 MAP Kinase Kinase Kinase AT1G73660 64.355 0.0 1196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Bva04g00872 PK_Tyr_Ser-Thr 3.9e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00872 - - gmx:100778331 1513.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00872 04 5732304 5740487 Bva04g00872 04 5732304 5740487 ECH