Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00862 ATGGGCAATAGGAACTGGTTTGATATTGCTCTATCATTGGGCACGAATAGGACTCCATTGCAATGCTTGGCACGATACCAGAGGAGCTTGAATCCTTCCATATTACACAGTGAATGGACTGAGGAAGAAGATGCTCAACTTTGCTCTGCTGTAGCTACTTTTGGTGAGAGCAACTGGCAGGCTGTAGCTTCTGTTTTAGAACGACGAACAGGGACCCAATGCTCTAATAGATGGAAAAAGGCCCTCTGTCCTGAAAGGAAAGGGGGCTATACACAAGAGGAGGATGAACGCCTAACAGTAGCTGTCCTGCTTTTTGGACGGAAATGGTATCAAATAGCTAAATTTGTTCCTGGTCGGACCCAGGCTCAGTGTAGGGACAGATACGTCAATAGTTTGGATCCTTCTTTGAAATGGGGTGGatggaccaaggaagaggatTCTAAACTGAAAGCAGCAATTGCCAAATATGGATTCTGCTGGTCTAAGATTGCTGAGGATATCCCTCCACGTACTGATAGTCAATGCCGAAAGAGATGGAAGGTGTTGTGTCCTGAACAAGTTCCTCTGCTtcaagaagcaagaaagagGCGGAAAGCTCTTATTGGTAACTTTGTTGATCGAGAGTCTGAGCGTCCTGCCCTTCTCAATGATTTTGAACCTCTAGCAATGATAGGTCCACCATCTGATGTTGAAACTTCAAATCTCCCTAAGAAACAGAAGCTGAAGCGGAGCAATCGTCCGAAGAAGATGAAACCCAGAAGACGTGCTGTAGAGGCTCAAACCATGAAAATACAGGAAACGGTAAAAGAAGATGAGGTTGAAATTGGTGGTATACATGATAAGCCCATTGAAGGAGTATTAGATCATTGCCTATTCCCTACTGCGTCCGTTTCAATGACTACCAATAGCTGTGAAACTCATCTTGATTTAAGTCCTAGAGTTGAGGCTAAAGTGCAGAATGGAAAAGATGATGATGACAACTTAACTCTTGCTTGCTTTTTACACAAaagatcaaagaagaaaaagctgGAATGTAAGAAAGATTTGTCTCCTGCAAGAGATGAATCTGAATCACTTTGGGATGTGGGCAAGCACTCGAAAAATGAGTTGTCGCAGAAATGTGATGCTGGTGGGACTCCTTATTTATCACCTAATCCTGATGATGCTGGGAACATGCAAACTGAGACCTCTGTGAATGAACCTGGGGAAATAGATGCAGTCATGGAAAATAATGCTGCTCGTGATGGAGAAGCGAAGAATTCAGAGGATGTAAATATGCGGACTGATCATGATGACAGTGATTTGACTCTTGCTTGCTTTATGAgaaacaaatcaaagaaaCGGGGTCGAGCCGCTAAAGGTAGTCCCGATTGCCCATCTGATAAGCAACATGTGCCCAGAAGATCCTGTAGAGGGCCTATCAAGAATCCAAGATACTTGTATTA 1445 0.4166 MGNRNWFDIALSLGTNRTPLQCLARYQRSLNPSILHSEWTEEEDAQLCSAVATFGESNWQAVASVLERRTGTQCSNRWKKALCPERKGGYTQEEDERLTVAVLLFGRKWYQIAKFVPGRTQAQCRDRYVNSLDPSLKWGGWTKEEDSKLKAAIAKYGFCWSKIAEDIPPRTDSQCRKRWKVLCPEQVPLLQEARKRRKALIGNFVDRESERPALLNDFEPLAMIGPPSDVETSNLPKKQKLKRSNRPKKMKPRRRAVEAQTMKIQETVKEDEVEIGGIHDKPIEGVLDHCLFPTASVSMTTNSCETHLDLSPRVEAKVQNGKDDDDNLTLACFLHKRSKKKKLECKKDLSPARDESESLWDVGKHSKNELSQKCDAGGTPYLSPNPDDAGNMQTETSVNEPGEIDAVMENNAARDGEAKNSEDVNMRTDHDDSDLTLACFMRNKSKKRGRAAKGSPDCPSDKQHVPRRSCRGPIKNPRYLY 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00862 481 ProSiteProfiles Myb-like domain profile. 133 183 IPR001005 -
Bva04g00862 481 Gene3D - 34 85 - -
Bva04g00862 481 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 86 IPR017930 -
Bva04g00862 481 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 30 IPR017930 -
Bva04g00862 481 CDD SANT 90 132 IPR001005 -
Bva04g00862 481 Pfam Myb-like DNA-binding domain 91 149 - -
Bva04g00862 481 MobiDBLite consensus disorder prediction 386 400 - -
Bva04g00862 481 ProSiteProfiles Myb-like domain profile. 86 132 IPR001005 -
Bva04g00862 481 MobiDBLite consensus disorder prediction 239 253 - -
Bva04g00862 481 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 127 IPR017930 -
Bva04g00862 481 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 2 451 - -
Bva04g00862 481 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 133 187 IPR017930 -
Bva04g00862 481 ProSiteProfiles Myb-like domain profile. 31 82 IPR001005 -
Bva04g00862 481 CDD SANT 38 80 IPR001005 -
Bva04g00862 481 MobiDBLite consensus disorder prediction 370 481 - -
Bva04g00862 481 SUPERFAMILY Homeodomain-like 112 184 IPR009057 -
Bva04g00862 481 SUPERFAMILY Homeodomain-like 2 44 IPR009057 -
Bva04g00862 481 MobiDBLite consensus disorder prediction 410 437 - -
Bva04g00862 481 SUPERFAMILY Homeodomain-like 33 128 IPR009057 -
Bva04g00862 481 CDD SANT 141 182 IPR001005 -
Bva04g00862 481 SMART sant 35 84 IPR001005 -
Bva04g00862 481 SMART sant 86 134 IPR001005 -
Bva04g00862 481 SMART sant 137 185 IPR001005 -
Bva04g00862 481 MobiDBLite consensus disorder prediction 450 468 - -
Bva04g00862 481 MobiDBLite consensus disorder prediction 226 258 - -
Bva04g00862 481 Pfam Myb-like DNA-binding domain 37 81 IPR001005 -
Bva04g00862 481 Gene3D - 86 136 - -
Bva04g00862 481 Gene3D - 137 185 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00862 5 215 MYB-Related Transcription Factor Family AT3G18100 65.258 1.01e-91 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva04g00862 Myb_DNA-bind_6 4.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00862 K09422 - gmx:100818474 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00862 04 5652870 5656430 Bva04g00862 04 5652870 5656430 ECH