Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00850 ATGGGAATAGCAAGTGTTTTGACGGAGAAAATGAAGCTCCTTGTGGTATTGCTTGTTTTGCAGTTCTGCTTTGCGGGAGTTCACATTGTCTCTAGACTTGCTCTAGACATTGGTGTCAGCAAAGTTGTTTATCCTGtttatagaaatataattGCTCTGCTTCTGCTGAGTCCACTTGCTTATTTTCTAGAGAAGAATGAAAGGCCACCCCTCACTTTCTCTTTGCTGGTTCAGTTCTTCCTTTTAGCATTATTGGGAATAACTGCAAACCAAGGGCTTTACTTGTTGGGGTTGTATTATGCATCTCCAACTTTTGCTTCTGCAATACAAAATTCAGTTCCTGCCATCACCTTTGTCATGGCCACAGCTCTAGGGTTTGAGCAGCTAAATATTGCAAGCATATATGGACTGGCAAAAGTCCTGGGGACCATAGCAAGTGTGGGGGGTGCTACTATAATTACTCTCTTCAAAGGCTCTCCTATTCTCCCCCACACACTCCAAATACCAGGAGATATCTTAGAAGCTGATGCATCTgcaagaaaaatgcaaaactgGAAATGGGGTTGCATATGCCTGCTTGGACATTGTTTATCATGGGCTGGTTGGATGGTTTTTCAGGCTCCTGTAGTGAAGAAGTATCCAGCAAAATTAACAATGACATCGTTCACATGCTTCTTTGGATTGATCCAGTTCTTGATCATAGCAGCCTTTGTTGAAACTGATTTGGAGCATTGGAAGATACAATCGGCAGAGGAGCTCTTTACCATCCTATATGCTGGAGTGGTATCATCGGGCATTGTCATATCCCTCCAAACATGGTGCATTCAAAAGGGTGGCCCGGTATGTGTTGCCGTCTTCCAGCCTGTGCAAACCATTTTAGTTGCAGGCATGGCATTTCTAATCCTTGGAGATCAGTTATACGCTGGATGGATTATGGGTGCAACTCCTATTGTGATTGATCTGTACTTAGTCCTATGGGGGAAGAACAAGGAAAGTGAAGTAAAAAAACAAGAGTCACCATTGGCAAGGCCATTACTTGATGCAGAAGAAGAGGATCAAGAAGATGATGCATCAGCAGCACAAGACATACCGTG 1094 0.4241 MGIASVLTEKMKLLVVLLVLQFCFAGVHIVSRLALDIGVSKVVYPVYRNIIALLLLSPLAYFLEKNERPPLTFSLLVQFFLLALLGITANQGLYLLGLYYASPTFASAIQNSVPAITFVMATALGFEQLNIASIYGLAKVLGTIASVGGATIITLFKGSPILPHTLQIPGDILEADASARKMQNWKWGCICLLGHCLSWAGWMVFQAPVVKKYPAKLTMTSFTCFFGLIQFLIIAAFVETDLEHWKIQSAEELFTILYAGVVSSGIVISLQTWCIQKGGPVCVAVFQPVQTILVAGMAFLILGDQLYAGWIMGATPIVIDLYLVLWGKNKESEVKKQESPLARPLLDAEEEDQEDDASAAQDIP 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00850 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 330 - -
Bva04g00850 364 PANTHER WAT1-RELATED PROTEIN 10 334 - -
Bva04g00850 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 144 - -
Bva04g00850 364 MobiDBLite consensus disorder prediction 348 364 - -
Bva04g00850 364 MobiDBLite consensus disorder prediction 332 364 - -
Bva04g00850 364 PANTHER WAT1-RELATED PROTEIN 10 334 IPR030184 GO:0016021|GO:0022857
Bva04g00850 364 MobiDBLite consensus disorder prediction 332 347 - -
Bva04g00850 364 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020|GO:0016021
Bva04g00850 364 Pfam EamA-like transporter family 15 144 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00850 Bva-Chr4 5588280 5590466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00850 6 358 Nodulin-like Gene Family AT3G18200 63.788 4.25e-164 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00850 - - gmx:100812601 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00850 04 5588280 5590466 Bva04g00850 04 5588280 5590466 ECH