Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00834 ATGTCTCAGTGTGTGTGCCGCAATGGAATTGGAGATGAATCTTCAGTGAATATGGATTCTGAGGTGTGGAGCAGCCATGGCATCAGAAAGAAAACCTTCGAGTACAGTGAACTTGAAGAAGCCACCAACAATTTCCACCCAAGTAGGAATCTTGGGAGTGGAAGCTATGGGACTGTACATCTTGGAACACTCAAAGATGGGCATCAGGTGGCAATAAAGCATTTAGGCAAGAGTTTGAGATTACATGATGAGAAACTGGAAGGAAAGAGACTCAGGGGTTTCACAAACGAAGTGGCAATGTTAACTCGCCTAAGTCATGAAAATCTTGTCCAAATTTATGGCACCTCTTCTCCCGGTACCTATGAACTGGTCATAGTACAAGAATACATTCCCAATGGTTGTGTTGCTGACCATCTTCTTGGCAGATTGAAGAAACCAGGAACACTCTCCTGGGTTACCAGATTGAATATTGCTGTGCAAACTGCAGGTGCATTGGCTTATCTCCATTCTTCTGGTGTAATCCACTGTGATGTGAAAACCAGAAATATTCTGCTAGACAGCAGTTTCAGTGCAAAAGTTGCAGACTTTGGCTTGTCAGGCCTTTCTCGACCCGGTGTTCAGCGTATATCCACCAACCCTGTAGGAACTCCTGGTTATCTAGATCCAGAGTATTATGAAAGATTTCATCTTTCTAACAAGAGTGACGTTTATAGCTTTGGGGTGGTATTGATTGAGCTGATATCTTCTATGCCGGCCTTTCGCAACTATGATGAGAAACAGCCCCTTCTGGCTAAGTTCGCCATCAACAAGATCCTTCATGAGCAACTAGATCAGCTGGTTGACCCAGCACTTGAATTTAAGTCAGATAAATGGGTACGTCAAACGGTAACTGCAGTGACCGAGTTGGCATTCAGGTGTCTGTATCGTAAGAGGAACATGAGGCCTTCCATGGCTGAGGTCTTTGACACTCTTAAGAGCATTAGAGCTGGGGCTCTACAAGTGCTTCCAGGTAGTGATTA 1019 0.4446 MLTRLSHENLVQIYGTSSPGTYELVIVQEYIPNGCVADHLLGRLKKPGTLSWVTRLNIAVQTAGALAYLHSSGVIHCDVKTRNILLDSSFSAKVADFGLSGLSRPGVQRISTNPVGTPGYLDPEYYERFHLSNKSDVYSFGVVLIELISSMPAFRNYDEKQPLLAKFAINKILHEQLDQLVDPALEFKSDKWVRQTVTAVTELAFRCLYRKRNMRPSMAEVFDTLKSIRAGALQVLPGSD 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00834 240 Pfam Protein kinase domain 1 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00834 240 ProSiteProfiles Protein kinase domain profile. 1 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00834 240 SUPERFAMILY Protein kinase-like (PK-like) 1 228 IPR011009 -
Bva04g00834 240 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 2 232 IPR044652 -
Bva04g00834 240 ProSitePatterns Serine/Threonine protein kinases active-site signature. 74 86 IPR008271 GO:0004672|GO:0006468
Bva04g00834 240 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 2 232 - -
Bva04g00834 240 Gene3D Transferase(Phosphotransferase) domain 1 1 235 - -
Bva04g00834 240 PIRSF ILK 1 234 - -
Bva04g00834 240 SMART serkin_6 1 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00834 Bva-Chr4 5492614 5495306 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00834 1 229 Receptor kinase-like Gene Family AT1G25390 53.247 1.16e-73 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bva04g00834 Pkinase 5.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00834 - - mtr:MTR_6g082700 283.108