Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00832 ATGACCCAAATCTCCTTCCATTACCGTAAGCCTCCCCAAACATACATTATCATCAGTGTCATCTTCATCTCCTTGGTTAAACTTGTTCTGTCTGTGAATCCACAATTTGAGGCCTGCACACCACGTAGTTGTGGAAATGGCCCAACCATCAAGTACCCTTTCTGGATTCCCGGGGATCAAGATTACTTTTGCGGCCATCCTCAGTTTGAGATTAGCTGCGATCACAAGAACCCATTTCTCAGAATTTCCAACGGAGAGATTTTACTCAAAGCTATTTCTTACtctaattcttcttttctggCAACCCACATGGCTGTCTATGAGGAAAACTGCCCTGCTCCAATGTATAATTTCAGCCTTGATCAAACTCCATTTACCTATACTTCTGATAATGccaatatctctttcttctaCAACTGTGCCACAGAACCTGTAGATTACCCCACTTATGAAGTAGATTGTGCCAAAAACGCAACCCATTATTCGTTTGCTGTTTTTCATAAGGAGGCACTGGAGAAAAACTATTCCTTGAGTGAGTGCCAGTTCACGTTTAATGCACCAGTTAGGGTCAATGATGCTGTGAATTTCACTAGCTTATTGCAAATGAATTACACAGAGATTTTAAAGATGGGGTTTGTTTTAAGTTGGACTGCATCTGATTGTGGGGACTGTGAGAAAAGTGGTGGACGCTGTGGATTTGATGATCATAAGTTTCTCTGCTTCTGCAGGGACAAGACTCATACCAGAAATTGTGAAGTTGAAAATCATATTAGTGTGAAAAATAAAGCGATTGTAGGGGTTTGTGCTTCTGCTTTCACTGTGCTTGTAATGCTGATTGCCTTCTTTATCTATCACCGCCGGAAGAAGATGAGTAATGCAAAATCATATGCAAGAACTGAGAACATTTCTTCTGTGCCCTCTTTAAGTTTGAAGGACCCAGAAAGGGGTAGCAAATACTTTGGACTCCCCGTCTTCTCCTATGATGAACTTGAAGAGGCTACTAACTACTTCGATTCTGAAAGAGAAATTGGAGATGGAGGCTTTGGAACAGTATATTTTGGCAAACTTCGAGATGGGCGTTACGTTGCTGTGAAGAGATTGTATGAGAAGAATTATAGGAGACTTGAACAATTTAAAACTGAGGTTGAGATCCTAGCTCGCTTTCGCCATCAGAATCTTGTCTCGCTCTATGGCTGCACCTCTCGCCACAGCCGTGAGCTCCTGCTTGTCTTTGGAGTGGTACTGATTGAGCTGATATCATCCATGCCTGCTGTTGATATCACAAGGCACCGgcatgaaataaatttgtctAACATGGCTATTAGTAAGATTCAAAGCCGTGAACTGCATGAACTCGTGGACCCAAATCTTGGGTTTGAATCAGATTAcagaataagaaaagagatCAGTGGTGTAGCAGAGTTGGCTTTTCAGTGCTTGCAGAGTTTGAAAGATATGAGGCCGTCTATGGAAGAAGTGCTGGAAAGACTGAAGGATATACAGAGTGATGGCAAACATAAAGGCAAGGCAGAGGAGATGGTTATCTCTGCAGATGACGCTGTGTTGCTCAAGAACGAACCACCTCCAGCTTCGCCGGATTCAAATCTGAGGAGCACATCTACAACAACACCAAATGATAGCAGATA 1646 0.4101 MTQISFHYRKPPQTYIIISVIFISLVKLVLSVNPQFEACTPRSCGNGPTIKYPFWIPGDQDYFCGHPQFEISCDHKNPFLRISNGEILLKAISYSNSSFLATHMAVYEENCPAPMYNFSLDQTPFTYTSDNANISFFYNCATEPVDYPTYEVDCAKNATHYSFAVFHKEALEKNYSLSECQFTFNAPVRVNDAVNFTSLLQMNYTEILKMGFVLSWTASDCGDCEKSGGRCGFDDHKFLCFCRDKTHTRNCEVENHISVKNKAIVGVCASAFTVLVMLIAFFIYHRRKKMSNAKSYARTENISSVPSLSLKDPERGSKYFGLPVFSYDELEEATNYFDSEREIGDGGFGTVYFGKLRDGRYVAVKRLYEKNYRRLEQFKTEVEILARFRHQNLVSLYGCTSRHSRELLLVFGVVLIELISSMPAVDITRHRHEINLSNMAISKIQSRELHELVDPNLGFESDYRIRKEISGVAELAFQCLQSLKDMRPSMEEVLERLKDIQSDGKHKGKAEEMVISADDAVLLKNEPPPASPDSNLRSTSTTTPNDSR 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00832 548 MobiDBLite consensus disorder prediction 531 548 - -
Bva04g00832 548 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 18 411 IPR044652 -
Bva04g00832 548 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 411 538 - -
Bva04g00832 548 SUPERFAMILY Protein kinase-like (PK-like) 318 410 IPR011009 -
Bva04g00832 548 Pfam Wall-associated receptor kinase galacturonan-binding 39 99 IPR025287 GO:0030247
Bva04g00832 548 MobiDBLite consensus disorder prediction 516 548 - -
Bva04g00832 548 Gene3D Phosphorylase Kinase; domain 1 311 411 - -
Bva04g00832 548 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Bva04g00832 548 Gene3D Transferase(Phosphotransferase) domain 1 412 521 - -
Bva04g00832 548 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 411 538 IPR044652 -
Bva04g00832 548 ProSiteProfiles Protein kinase domain profile. 337 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00832 548 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 18 411 - -
Bva04g00832 548 Pfam Protein kinase domain 338 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00832 548 Pfam Wall-associated receptor kinase C-terminal 159 245 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00832 Bva-Chr4 5483312 5488099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00832 411 547 Receptor kinase-like Gene Family AT1G25390 48.649 3.86e-30 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bva04g00832 WAK_assoc 3.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00832 - - lja:Lj2g3v0716020.1 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00832 04 5483312 5488099 Bva04g00832 04 5483312 5488099 ECH