Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00830 ATGGCTGCCAAACGCTTTCTCGATGATTCTGACCCAGATAACCCAAACGACAACAAACGCACGAGACCTGCTACAACTACAAGACCTTCTTTTGCTTCGGTAATAGGAGAAATGGTTATGGTGAAAAACTTGCAGAACCTTTTCTCAGGCTTGGAACCTTTGCTCAGAAGAGTGGTGAATGAAGAGGTAGATCGTGCTATGAGACATTGTTGTCCACGTTCAATAACTAGGTCACCTTCTTTGCAAATAAAAGCCATGGAGCAACCCTCAAGCTTGCAGTTAATGTTCAGCAAGAAGCTTTCTCTACCTATATTCACTGGCAGCAGGATTCTAGACATTGATGGGAACCCTGTGACCATTATTCTTGTTGACAAGAATGATGATCAAATGGTTCCCACAAGTCTCCCTCACCCGAGCAAGCTCGAAATCGTGGTTCTTGATGGAGATTTTCCACCTGGGGATAATGAGGCATGGATTAGTGAGCAATTCAACAGCCACATAGTGAAGGAGAGGGTCGGAAAGCGACCGTTGCTCACCGGAGAGTTGAATATCACCATGAGGGATGGAATTGCACCAATTGGGGACATTGAGTTTACTGATAACTCTAGCTGGATCAGGAGTAGGAAGTTTAGGGTTGCTGTGAGAGTGGCCGCAGGGAGCATTCAAGGTGTCCGAATTCGTGAAGCCATGACTGAGGCATTTGTTGTCAAAGATCATCGCGGAGAATTGTACAAGAAGCACCATCCACCAATGTTGCATGATGAAGTTTGGCGCCTAGAGAAGATTGGAAAAGATGGAGCTTTCCACAAAAAATTGTCTGAAGAGGGAATCAAAACAGTCCAAGACTTTCTCAAAATGTCTGTGGTTGACCCTATTAAGCTCAGAaagGTTTTAGGGATTGGGATGTCAGATAAAATGTGGGATGTGACAATCAAGCATGCAAAGACTTGCAACATGGGAAACAAGCTTTATGTGCACCGTGGATCTAATTTCACTCTCCTTTTGAATCCTGTCTGCCAAGTGATTAAAGCTGAAATCAATGGCCAAGTTATTCCCACCAGAGAGCTCAGCAATCTCAATAGGAGCTATATAGAGAAATTGGTGAGAGATGCATATCTGAAATGGAATAACTTGGAAGAAATTGATGCAGTTTTGAATGATAATAACATAGCCTTATTAACACAagGTGAAACTGTGGATCGGCAGTATccaaacaacaacaaccaTCAATCATGGATAGTGGCATATGAGGAAAACGATTACTATGGGGATCATAAACCAGCATCAATAGAGGTGACTGCAGGCACTGGCTCTAGCTCTGGCTCTGGCAATGAATGGGCCTTAAACCATACATATGCAGCAACATCACCATTTGGAAGTGGCATTACTTATAGCTTCTCAGGGTCACATTCTGATGATGATATAACCCCTTCAACTAGGTGGACTATTAATTA 1454 0.4257 MAAKRFLDDSDPDNPNDNKRTRPATTTRPSFASVIGEMVMVKNLQNLFSGLEPLLRRVVNEEVDRAMRHCCPRSITRSPSLQIKAMEQPSSLQLMFSKKLSLPIFTGSRILDIDGNPVTIILVDKNDDQMVPTSLPHPSKLEIVVLDGDFPPGDNEAWISEQFNSHIVKERVGKRPLLTGELNITMRDGIAPIGDIEFTDNSSWIRSRKFRVAVRVAAGSIQGVRIREAMTEAFVVKDHRGELYKKHHPPMLHDEVWRLEKIGKDGAFHKKLSEEGIKTVQDFLKMSVVDPIKLRKVLGIGMSDKMWDVTIKHAKTCNMGNKLYVHRGSNFTLLLNPVCQVIKAEINGQVIPTRELSNLNRSYIEKLVRDAYLKWNNLEEIDAVLNDNNIALLTQGETVDRQYPNNNNHQSWIVAYEENDYYGDHKPASIEVTAGTGSSSGSGNEWALNHTYAATSPFGSGITYSFSGSHSDDDITPSTRWTIN 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00830 484 Pfam Calmodulin binding protein C-terminal domain 322 381 IPR046829 -
Bva04g00830 484 Pfam Calmodulin binding protein-like N-terminal domain 92 239 IPR046831 -
Bva04g00830 484 PANTHER OS02G0177800 PROTEIN 1 480 IPR012416 GO:0005516
Bva04g00830 484 PANTHER PROTEIN, PUTATIVE-RELATED 1 480 - -
Bva04g00830 484 MobiDBLite consensus disorder prediction 1 28 - -
Bva04g00830 484 Pfam Calmodulin binding protein central domain 251 317 IPR046830 -
Bva04g00830 484 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00830 Bva-Chr4 5474099 5476765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00830 3 383 Calmodulin-binding Proteins AT5G57580 50.000 1.08e-124 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00830 - - aip:107644281 625.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00830 04 5474099 5476765 Bva04g00830 04 5474099 5476765 ECH