Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00821 atgGGTTTTCACTGTGCTGCGAAATCAGTTCAGGGACTCTCATTCTGGGCAGCAGATCTCTGTGGGGCTTGCACCTTCTCGAGATTTGTGAAGATGTACTCATCAAGGAAGAAAATTCACAAAGATAATGATGCTGAGCCAACTGAGTTTGAGGAGTCAGTCGGACAGGCATTGTTTGATTTGGAAAATACCAACCAGGAATTGAAAAGTGATCTAAAAGATCTGTACATCAATTCTGCACTCCACGTTGATGTTTCTGGAAATCGCAAGGCTGTGGTTATTCATGTCCCCTATAGATTAAGGAAAGCTTTCCGGAAGATTCATGTTAGGCTTGTCAGAGAGCTTGAGAAGAAATTCAGTGGAAAGGATGTTGTCCTGATTGCCACCCGGAGGATATTGAGGCCACCAAAGAAGGGTTCTGCCGTTCAGCGTCCCCGCAGTCGTACACTCACTGCTGTGCACGAGGCAGTGCTAGAGGATGTTGTATTACCAGCTGAGATTGTTGGGAAGCGTGTTAGGTATAGAGTTGATGGCTCCAAAATCATGAAGGTTTTCTTGGACCCTAAGGAGCGAAACAACACTGAATACAAGCTTGAGACTTTTGCCGCAGTATACAGGAAGCTGACTGGCAAAGATGTAGTGTTTGAGTATCCTATCGCAGAAGCTTA 668 0.4506 MGFHCAAKSVQGLSFWAADLCGACTFSRFVKMYSSRKKIHKDNDAEPTEFEESVGQALFDLENTNQELKSDLKDLYINSALHVDVSGNRKAVVIHVPYRLRKAFRKIHVRLVRELEKKFSGKDVVLIATRRILRPPKKGSAVQRPRSRTLTAVHEAVLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLTGKDVVFEYPIAEA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00821 222 Coils Coil 58 78 - -
Bva04g00821 222 PANTHER 40S RIBOSOMAL PROTEIN S7 20 222 IPR000554 GO:0003735|GO:0005840|GO:0006412
Bva04g00821 222 ProSitePatterns Ribosomal protein S7e signature. 110 123 IPR000554 GO:0003735|GO:0005840|GO:0006412
Bva04g00821 222 PANTHER 40S RIBOSOMAL PROTEIN S7 20 222 - -
Bva04g00821 222 Pfam Ribosomal protein S7e 38 217 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00821 Bva-Chr4 5425173 5428008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00821 32 222 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 79.581 7.97e-114 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00821 K02993 - gmx:100527680 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00821 04 5425173 5428008 Bva03g00662 03 3966006 3968620 ECH
Bva04g00821 04 5425173 5428008 Bva04g00821 04 5425173 5428008 ECH