Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00815 ATGGAGGAAAACTTACCCCCTGGTTTCAGATTCCATCCTACAGATGAAGAGCTCATCACGTTTTATCTGACAAGGAAAGTTTCTGATAATAGTTTCACATCCAAGGCTATAGCAGTGGTTGATCTCAACAAGTCTGAACCTTGGGACCTCCCAGGTAAGGCGTCCATGGGAGAGAAGGAATGGTATTTCTTCAGCTTAAGAGATCGGAAGTATCCAACTGGGCTTCGAACAAACCGTGCCACAGAATCAGGGTACTGGAAAACCACAGGGAAAGACAAGGAAATTTTCCGTGCTGGTGTCTTGGTGGGAATGAAGAAAACCCTAGTCTTCTACAAGGGAAGAGCTCCGAGGGGTGAAAAAAGCAATTGGGTCATGCATGAATACAGACTGGAAAACAAGCATTCCTTTAGGCCTTCAAAGGAAGAATGGGTGGTTTGCAGGGTATTCCAGAAGAGTGCAGCAGCAAAAAAGCCACAGCCAACATCATCCTCTCAACCTTCAATGGATTCTCCCTGTGATACAAATTCAATCATCAATGAATTTGGAGACGTAGAGCTGCCAAACCTAAACAGCATTGCAAATTCTTCATCAAGTGGATTCCCTAATAACATTTCAGCACAAACTTACAATAATGTCAACACAAACATGAACTTGAACGTGAATTGGCCATCATCAGGTGCAAGTGATCAGATTCCCCCACCCCATGTTCCATCCCTTCCATGGCCTTCTGCGGGCTTGTTGAGTCCAAATCTTTCAGTGAATTCCTTGCTTCTCAAGGCATTACAGCTTAGGAGTAGTTATCAACAAACAGAAGCAGCTACAGCTACAGCTACAGCTACAGAACATTTTGCCCCATATATTCCACAAGGAGTTTCTTCTCACCTTGGAACTACTGATCTGAATTCAACGTCTAGTCTTACGGCTTCTTcctcaaaaattttagaatacaTGCCACAACAGCAACAGCAGGAGCAACCATTCAATATGGACTCCATTTGGTCATG 1004 0.4323 MEENLPPGFRFHPTDEELITFYLTRKVSDNSFTSKAIAVVDLNKSEPWDLPGKASMGEKEWYFFSLRDRKYPTGLRTNRATESGYWKTTGKDKEIFRAGVLVGMKKTLVFYKGRAPRGEKSNWVMHEYRLENKHSFRPSKEEWVVCRVFQKSAAAKKPQPTSSSQPSMDSPCDTNSIINEFGDVELPNLNSIANSSSSGFPNNISAQTYNNVNTNMNLNVNWPSSGASDQIPPPHVPSLPWPSAGLLSPNLSVNSLLLKALQLRSSYQQTEAATATATATEHFAPYIPQGVSSHLGTTDLNSTSSLTASSSKILEYMPQQQQQEQPFNMDSIWS 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00815 334 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
Bva04g00815 334 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 269 - -
Bva04g00815 334 SUPERFAMILY NAC domain 3 151 IPR036093 GO:0003677|GO:0006355
Bva04g00815 334 PANTHER BNACNNG63190D PROTEIN 2 269 - -
Bva04g00815 334 Gene3D NAC domain 14 155 IPR036093 GO:0003677|GO:0006355
Bva04g00815 334 ProSiteProfiles NAC domain profile. 5 151 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00815 Bva-Chr4 5380137 5382184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00815 1 333 NAC Transcription Factor Family AT3G18400 58.790 4.84e-120 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva04g00815 NAM 1.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00815 - - gmx:100780030 469.544