Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00810 ATGCGATTAAGCTGTAACGGTTGCCGAGTCCTCCGCAAAGGTTGTACGGCCGATTGCCCCATTCGACCCTGCCTTCAGTGGATCAAATCCTCTGAATCCCAGTCCAACGCCACGCTCTTCCTCGCCAAGTTTTACGGCCGCGCCGGCCTCCTCAACCTTATCAATGCCGGAACCCCACATCTCAGACCAGTGATTTATAAATCCTTGCTATACGAAGCTTGTGGGCGACTTGTTAACCCAATTTTCGGGTCAGCAGGGCTGCTTTCATCCGGGAGTTGGAACCTCTGTCAAGCCGCGGTGGAAGCCGTTCTGAGAGGTGAGCCGATTACGCAAGTTTCCTCCGAATCGGCTTTCGATGGTGCGAGTCCACTGCTCAAGGCCTGCGATATTCGCCACGTGGCCAAGAAAGGAAACTCTCGCGTCTCTGATAAGCTCCACAAGGTCAAGTCTCAGAGGCAGTTCAAGCGCGCAACTGAAAAGCCGAAGCCCCAATTCCAAGTAGAGCCGGCAGCGGAGTTGACGGTGCAGTCGGGGAACGAATTTGATAAGTCGGTGAGTCATGACTCGGAATTGAGTGAACATCGGAGTCAGGGTGGCAGTGTCAGCGGGGAAGCTGATAGCAGTTCCGTTGAGACGGTGGAGGCTTCGCTGGCTAAGCGTGACCGGAGAAGCGAGGAAGATAGCGATTTAGAGCTAGACTTAACTTTAGGATGGGGTCCACTGAGAAATAACATAAGTAAATTGCAAGCAACTCTTGATCTTTGTGATTA 770 0.5273 MRLSCNGCRVLRKGCTADCPIRPCLQWIKSSESQSNATLFLAKFYGRAGLLNLINAGTPHLRPVIYKSLLYEACGRLVNPIFGSAGLLSSGSWNLCQAAVEAVLRGEPITQVSSESAFDGASPLLKACDIRHVAKKGNSRVSDKLHKVKSQRQFKRATEKPKPQFQVEPAAELTVQSGNEFDKSVSHDSELSEHRSQGGSVSGEADSSSVETVEASLAKRDRRSEEDSDLELDLTLGWGPLRNNISKLQATLDLCD 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00810 256 MobiDBLite consensus disorder prediction 141 166 - -
Bva04g00810 256 MobiDBLite consensus disorder prediction 215 230 - -
Bva04g00810 256 MobiDBLite consensus disorder prediction 180 230 - -
Bva04g00810 256 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Bva04g00810 256 PANTHER LOB DOMAIN-CONTAINING PROTEIN 41-LIKE 1 248 - -
Bva04g00810 256 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Bva04g00810 256 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 248 - -
Bva04g00810 256 MobiDBLite consensus disorder prediction 195 214 - -
Bva04g00810 256 MobiDBLite consensus disorder prediction 141 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00810 Bva-Chr4 5357030 5358060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00810 1 241 AS2 family AT3G02550 48.980 2.26e-73 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva04g00810 LOB 6.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00810 - - zju:107418786 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00810 04 5357030 5358060 Bva04g00810 04 5357030 5358060 ECH