Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00794 ATGTACGGTGGAGATGAAGTATCAGCAATAGTGGTTGACTTGGGCTCCCACACATGTAAAGCCGGTTACGCTGGTGAAGATGCTCCCAAAGCTGTGTTCCCCTCTGTTGTTGGAGCAATTGATCAAATGGACGTTGATGAACCTGATAATGCAGAAAAGAACTCTGGATCTACTGtggattcaaaaaataatgtcaGAAATATTGATTCTGAAAAAAACAAGGGAAAACGCAAACTATACGTAGGATCTCAGTCCTTAGGATACCGTAGAGACAATATGGAGGTTCTGTCACCATTAAAGGATGGTGTTGTTGTTGACTGGGATATTGTTGACAACATATGGGATCATGCCTTCAGGGAATGCTTATTGATTGATCCTAAAGAGCATCCAATGCTGCTTGCTGAACCTTCTTCTAACACACAACAACAGAGAGAAAGGACTGCAGAGCTTATGTTTGAAAAGTACAACGTACCTGCACTGTTTTTGGCCAAGAATGCTGTTCTGACATCTTTTGCATCAGGGCGTGCTACCTCACTGGTTGTTGATTGTGGTGGAGGATCAACTATAATTGCACCAGTACATGATGGTTATGTTCTTCAAAAGGCTGTGGCAACTTCTCGTATTGGAGGAGAATTTCTCACAGACTGCTTGATGAAAAGTTTGGAAAGCAAAGGTATCATGATTAAACCCCGTTATTCCTtcaagagaaaggaaatacGACCTGGAGAGTTTCAGACTGTGGACCTAGATTTTCCAAATACAACTGAAAGCTACAAGCTCTATTCCCAGAGGGTGATCGTTAGTGATATCAAGGAATGTGTGTGCCGCGCTCCAGATACTCCTTATGATGAGAGTGGATATTCAAATATTCCAATGACTTCATATGAGCTTCCTGATGGCCAGACTATTGAAATTGGAGCTGATAGATTCAAGATTCCggatattctttttaatccATCCCTTGCTCAGACAATCCCTGGCATGGAGAATTTTGCGGAAATTGCTCCTACAGCTCGTGGTCTGCCACAAATGGTTATAGAGAGTATTAATAAGTGTGATGTGGACATTCGAAGAGAATTATTTAGTAGCATTCTGCTTGCTGGTGGCACAGCTTCGATGCAGCAATTGAAGGAACGTATTGAGAAAGACTTGCTAGAGGAGTCCCCTCAAGCTGCTAGAGTAAAGGTATTAGCCAGTGGAAATGCGACTGAAAGAAGGTTCAGTGTTTGGATTGGGGGAAGCATATTGGCTTCTCTTGGCTCCTTCCAACAAATGTGGTTCTCCAAATCTGAGTACGACGAGCACGGAGCTTCCTATATTCAAAGAAAGTGTCCTTG 1337 0.4129 MYGGDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDVDEPDNAEKNSGSTVDSKNNVRNIDSEKNKGKRKLYVGSQSLGYRRDNMEVLSPLKDGVVVDWDIVDNIWDHAFRECLLIDPKEHPMLLAEPSSNTQQQRERTAELMFEKYNVPALFLAKNAVLTSFASGRATSLVVDCGGGSTIIAPVHDGYVLQKAVATSRIGGEFLTDCLMKSLESKGIMIKPRYSFKRKEIRPGEFQTVDLDFPNTTESYKLYSQRVIVSDIKECVCRAPDTPYDESGYSNIPMTSYELPDGQTIEIGADRFKIPDILFNPSLAQTIPGMENFAEIAPTARGLPQMVIESINKCDVDIRRELFSSILLAGGTASMQQLKERIEKDLLEESPQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSKSEYDEHGASYIQRKCP 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00794 445 SMART actin_3 7 445 IPR004000 -
Bva04g00794 445 SUPERFAMILY Actin-like ATPase domain 174 444 IPR043129 -
Bva04g00794 445 MobiDBLite consensus disorder prediction 45 70 - -
Bva04g00794 445 CDD NBD_sugar-kinase_HSP70_actin 97 209 - -
Bva04g00794 445 Gene3D - 388 445 - -
Bva04g00794 445 PANTHER ACTIN 2 444 IPR004000 -
Bva04g00794 445 Gene3D - 1 181 - -
Bva04g00794 445 Pfam Actin 4 444 IPR004000 -
Bva04g00794 445 Gene3D Actin; Chain A, domain 4 210 323 - -
Bva04g00794 445 Gene3D - 182 384 - -
Bva04g00794 445 PANTHER - 2 444 - -
Bva04g00794 445 SUPERFAMILY Actin-like ATPase domain 5 181 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00794 Bva-Chr4 5179981 5191563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00794 1 444 Cytoskeleton Gene Families AT5G09810 37.584 4.62e-96 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00794 K11340 - gmx:100785066 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00794 04 5179981 5191563 Bva04g00794 04 5179981 5191563 ECH