Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00787 ATGGATTTAGAGGAAAAATTCCTGGCTAAAGTTTCTGGTGTTCAAAGCCTTTCTTCTAGCGTGCAAAGCACTCCAGAGAAGAATGGTCATTCAGATGATGCTTCAAGAAGTCCAGAACTCCTTCAGGAATTCTTGAAATCTGGTACAAAGAAGGAACTTCTTCGAACATGCTTTGATAAGGACAAAAAGAACATTTCATCAAAAAGCAGGATGATAGATACTAAGTCAACCGGTAAGATAAACAAGAAACAGGACAATAAAAAGGCTTCAAGTCTCAGCAACCAATCCTATGGGAAGCAACAGAGAAAGGGTGAAAACCCCACAAGACTTGCGCCAACTTCTGACCTGTCCTCTGATTTTGGAAATTCAAACTCCTGGATCTGTAAAAATTCTGCTTGTAGAGCTGTTCTATCTATTGATGACACATTTTGTAGAAGGTGCTCTTGCTGTATCTGCCACCTTTTTGATGATAACAAGGATCCTAGTCTTTGGCTGGTATGCACTTCTGAATCTGCTCAAGGAGAATCATGTGGGCTATCTTGTCACATAGAGTGTGCTCTTCAGCATGAAAAAGTGGGAGTGGTTGATCACGGGCAGCTGATGCAACTTGATGGTAGTTATTGCTGTGCATCTTGTGGTAAAGTTTCAGGGATACTTGGCTGTTGGAAGAAGCAGCTAAATATAGCAAAAGATGCTCGGCGTGTAGACATATTCTGTTATAGGATATATTTGAGTTACAGGCTTTTGGATGGGACTTCAAGGTTTAAAGAACTTCATGAAATTGTAGAAAATGCGAAGGCTAAACTGGAAACAGAAGTTGGTCCTGTGAACGGAGTTTCTTCCAAGATGGCACGAGGCATTGTCAGCAGACTCTCTATAGCTGGTGACGTGCAGAAACTCTGCTCTCTTGCAATTGAGAAAGCTGATGAATGGTTGGCAACTATTTCCAATGTGGATCCAGATTCTGGAGAGGGTTCACTTCCTGCTGCCTGcaagtttttctttgaagaagtttcttcttcctctgtcATAATCATATTGGTTGAAATGCCAAATGCATCTTCTGAGGACATTAAAGGCTACAAGCTCTGGTATTACAAGAGTCGGGAGGAGTCACACACAAAGGATCCTGTTTGTGTGTTTCCAAGATCTCAGAGGAGGATATTGATATCCAACCTCCAGCCTTGCACAGAATATACTTTTCGGATTATATCCTATACAGATAGTGGTGACCTCGGTCATTCTGAAGCCAAGTGTTTCACCAAGAGTATTGagataataaacaaaaatcccTCTTCATTAGTTACATTGAATCACAAGAAAGAGAACCATCAAACTGGAGGCAGTTCTTCTGGCTCTAAAACTGAGCATAATCCTGGTATAGGAGATTGTGGATTTAAGGTTCGAGATCTTGGAAAAATCTTGCGTCTTGCTTGGGCTCAGGAACAAATTTGTGTTGATGGGTTTTGCCGTGCGGATGTGAAAAATTGCTGCGAAGGAAGCAAAATGGTCAAACCTGAAACTCAAGAAGAAAGGTTGCCTACAGTTTCACGTCTGGATTTAAATGTTGTTTCGGTGCCTGATCTAAATGAAGAACTGACACCTCCTTTTGAGTCTTCAAGGGATGAAGATAATGGTTGCACCTTGCAGCAGGCTGTTGAGGCAGATGACGATGCTGCTTCTCATGATGTTGAGAAAAATGGTTTAGCAAGATCACATGGCAGTGGCGACTCTCAAGCCTGGTCACATGGACCAACTAGAGAAGTTCTGGCTGTTGATTCCTGTGGAGATGTAAATAGGAAAAGGGCAGCAAGCACAAATGAAGAGATGCATGATTGTGACAGCACTTTAATAAATGACTCTCCTTTACACTTATCTGATGGTATATGTTCCTTGGATGAGAACTTTGAGTATTGTGTGAAAGTAATTCGTTGGCTAGAATGTGAGGGTCACATCAAACAAGAATTTAGGTTGAAATTGCTAACATGGTTTAGTTTGAGGTCAACAGAGCAAGAACGTAGGGTGGTTAATACCTTTATTCAAACTCTGATCGACGATCCAAGTAGTTTGGCAGGACAACTGATCGACTCCTTTTCTGATATTATCTCCAACAAGAAGCCAAGAAATGGATTCTGTAGTAAGCTGTGGCATTA 2153 0.405 MPNASSEDIKGYKLWYYKSREESHTKDPVCVFPRSQRRILISNLQPCTEYTFRIISYTDSGDLGHSEAKCFTKSIEIINKNPSSLVTLNHKKENHQTGGSSSGSKTEHNPGIGDCGFKVRDLGKILRLAWAQEQICVDGFCRADVKNCCEGSKMVKPETQEERLPTVSRLDLNVVSVPDLNEELTPPFESSRDEDNGCTLQQAVEADDDAASHDVEKNGLARSHGSGDSQAWSHGPTREVLAVDSCGDVNRKRAASTNEEMHDCDSTLINDSPLHLSDGICSLDENFEYCVKVIRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLIDSFSDIISNKKPRNGFCSKLWH 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00787 368 PANTHER VIN3-LIKE PROTEIN 2-RELATED 2 368 IPR044514 GO:0010048|GO:0040029
Bva04g00787 368 SUPERFAMILY Fibronectin type III 7 67 IPR036116 GO:0005515
Bva04g00787 368 Pfam Fibronectin type III domain 5 64 IPR003961 GO:0005515
Bva04g00787 368 ProSiteProfiles Fibronectin type-III domain profile. 1 77 IPR003961 GO:0005515
Bva04g00787 368 Gene3D Immunoglobulins 1 75 IPR013783 -
Bva04g00787 368 PANTHER VIN3-LIKE PROTEIN 1 2 368 - -
Bva04g00787 368 CDD FN3 2 62 IPR003961 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00787 Bva-Chr4 5137986 5144932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00787 1 361 PHD Gene Family AT3G24440 43.011 3.33e-82 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00787 - - gsj:114418583 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00787 04 5137986 5144932 Bva04g00787 04 5137986 5144932 ECH