Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00781 ATGAAGAAGGTCTTTTCAATCCctcatttatattttgcaCTTGTCATTGCCTTGTTTCTGGGCACACTTTCCCTGTGTGCCTCCAACAAGGACCCCGGATTCAGCCATGGAAGTCTTACCGATGCAGAAGCCATGTACATTAGGCAGCGCCAGCTTCTCTACTACAGGGATGAGTTCGGTGACAGAGGAGAGAAGGTGACTGTAGACCCATCTCTTGTTTTCGAAAATGATCGTATAAAAAATGCTTATGTAGCTCTACAAGCTTGGAAGCAAGCTATTCTTTCTGATCCGCAAAATTGTACTCTGAACTGGGTTGGAGCCAATGTCTGTAACTACAGCGAGGTTTACTGTGCTCCGGCGCTGGACAATCCCAAGATCCGCACCGTCGCTGGCATTGATCTCAACCATTGTGACATTGCTGGGTATTTGCCAGAAGAACTCGGTCTACTTGTGGATCTTGCACTCTTCCATATCAACTCCAACAGGTTCTGTGGTACTGTGCCTCACAAGTTTGATAAACTGGTTCTGCTCTTTGAATTGGATCTCAGTAACAACAGGCTTGCTGGCAAGTTCCCTGAGGTGGTTCTGAGGCTTCCATCGTTGAAGTTTCTGGATCTGAGATTCAATGAATTTGAAGGGACTGTGCCCAAAGAGCTCTTCGATAAGGATCTGGACGCGATCTTCATCAACGACAATCGTTTTGTGTTCGATCTACCAGACAATTTCGGGAACTCTCCGGTTTCAGTTATTGTTCTCGCTAACAACAGGTTCCATGGTTGTATTCCAGCGAGCTTAGGCAACATGACGAACCTCAATGAGATTATTTTCATGAACAATAACTTCCGTTCCTGTTTGCCTTCTGAGATTGGGTTGCTGAAGAACGTGACGGTGTTCGATGTGAGCGTCAATGAGTTATTGGGTCCGTTGCCCAACGCCATTGGAAGCATGGTTAGCCTTGAGCAGCTGAATGTAGCTCACAATTTGCTTTCTGGAAAAATTCCTCCGAGCATATGTTCGTTGCCCAATTTGGAGAACTTTACGTACTCGTATAACTTCTTCACCGGCGAGCCTCCAAAATGCCTGAGCTTACCGGCGTTTGATGACAGGAGGAATTGCTTGCCGGCGAGGCCATTACAGAGGTCAGCGGCACAATGTAAGTCGTTCTTGTCAAAGCCTGTGGATTGTAACTCATTTAAATGTGCAGCATTTGTTCCTTCTCCGCAAACCCCTCCATTTATTCCTTCACCGCCTGTTGTGATCCCGTCGCCGCCTCCCCAAGTTTCACCTTCACCTCCTCCACCGGTTGCTCTTCCACAacctccacctccacctccaccCCCAGTTTACtcccctcctcctcctccttctcCCCCTCCACCGGTGTATTCACCCCCTCCCccacctccacctccacctccTCCACCAccgccaccaccaccaccacctgtGTACTCTCCACCGCCTCCTCCTCCTTCCCCTCCACCACCGTCTCCGTCTCCACCCCCTCCTTCACCTCCACCACCCTCTCCATCACCTCCTCCTCCATCTCCCCCGCCGCCTTCACCTCCTCCACCTTTGGCATCCCCGCCACCACCTTCCCCTACCCCTCCATCTCCAACACCACCCTCACCAACTCCAGCTCCTCCATATTGCGTCCGGTCTCCACCACCGCCACCTCCAAATTCACCACCACCACCTGCTCCAGTATTCTCCCCGCCCCCTCCTACCCCTTACTATTATAATTCACCACCGCCGCCACATTATTCGCCCCCACCACCTCCTCGCTCGCCTCCGCCACCTGTTTATCCATATCTATCACCACCGCCACCTCCTCCTGTCCATTCTCCTCCTCCACCGGTCCACTCTCCACCCCCACCATCTCCCCCACCTTGTATAGAAccacctccacctccacctccacctccaTCCCCACCACCATGTGAAGAGCATTCACCCCCACCGCCTCCACTTTCTCCCACGCCTTACCATGCACCACCATCACCATCACCGCCACCACCACCTGTATATGCTTCTCCACCTCCCCCAGTTCATTATAGTTACccatcaccaccaccaccagtTTACCATTCTCCTCCACCATCATCACCGCCTCCATGTGAAAATCCACCACCTTCTGCACCTCCACCTCCGCCAATTATATACGGAAGTCCACCACCTCCTGCCCCTATATATGAAGGGCCTTTGCCACCTATCTACGGAGTCTCATACGCTTCTCCTCCTCCACCACCCTTCTATTG 2258 0.4814 MKKVFSIPHLYFALVIALFLGTLSLCASNKDPGFSHGSLTDAEAMYIRQRQLLYYRDEFGDRGEKVTVDPSLVFENDRIKNAYVALQAWKQAILSDPQNCTLNWVGANVCNYSEVYCAPALDNPKIRTVAGIDLNHCDIAGYLPEELGLLVDLALFHINSNRFCGTVPHKFDKLVLLFELDLSNNRLAGKFPEVVLRLPSLKFLDLRFNEFEGTVPKELFDKDLDAIFINDNRFVFDLPDNFGNSPVSVIVLANNRFHGCIPASLGNMTNLNEIIFMNNNFRSCLPSEIGLLKNVTVFDVSVNELLGPLPNAIGSMVSLEQLNVAHNLLSGKIPPSICSLPNLENFTYSYNFFTGEPPKCLSLPAFDDRRNCLPARPLQRSAAQCKSFLSKPVDCNSFKCAAFVPSPQTPPFIPSPPVVIPSPPPQVSPSPPPPVALPQPPPPPPPPVYSPPPPPSPPPPVYSPPPPPPPPPPPPPPPPPPPVYSPPPPPPSPPPPSPSPPPPSPPPPSPSPPPPSPPPPSPPPPLASPPPPSPTPPSPTPPSPTPAPPYCVRSPPPPPPNSPPPPAPVFSPPPPTPYYYNSPPPPHYSPPPPPRSPPPPVYPYLSPPPPPPVHSPPPPVHSPPPPSPPPCIEPPPPPPPPPSPPPCEEHSPPPPPLSPTPYHAPPSPSPPPPPVYASPPPPVHYSYPSPPPPVYHSPPPSSPPPCENPPPSAPPPPPIIYGSPPPPAPIYEGPLPPIYGVSYASPPPPPFY 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00781 752 PRINTS Proline rich extensin signature 405 426 - -
Bva04g00781 752 PRINTS Proline rich extensin signature 427 443 - -
Bva04g00781 752 PRINTS Proline rich extensin signature 456 473 - -
Bva04g00781 752 SUPERFAMILY L domain-like 83 365 - -
Bva04g00781 752 MobiDBLite consensus disorder prediction 415 675 - -
Bva04g00781 752 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 5 12 438 - -
Bva04g00781 752 MobiDBLite consensus disorder prediction 692 726 - -
Bva04g00781 752 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 12 438 - -
Bva04g00781 752 Gene3D Ribonuclease Inhibitor 243 375 IPR032675 -
Bva04g00781 752 Gene3D Ribonuclease Inhibitor 83 242 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00781 Bva-Chr4 5105651 5108755 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00781 39 450 Leucine-rich Repeat extension Gene Families AT3G24480 72.397 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00781 - - zju:107431856 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00781 04 5105651 5108755 Bva04g00781 04 5105651 5108755 ECH