Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00780 ATGGATAATATTGAAGATGATGCAAGGTACCCGCCGAAGCCCTACACTTTGTACCGTCATAATACTTCTCATCGCCAGAAACATTCAACTCGAGGTGCCCCTTATCTTCCACCGATTAATAGTCGCTACGCggaagaggaggaggaggaagaataTGAAGAATTGGATGGATATGAAATGGAAAATGACCAAGAGGAGGACGAAGATGATGGAGAAAATGGGTACGGTGGGAATTTCGAAGACGATGACGATTTTGAGAGAAACTCAAAGAAGAGGAAATTGCGGAATTCTTCTGTTTTGAACTATGAGTTTGCGCCTCGTGTGAAATTTTCACAGGGGAATAGGAATTCAGCAGATGAATGGACCGAGCATGCCACGTTTGTGTTGTTGGAGGTTTGGGGAGacaaatttcttcaacttgggAGGAAGAGTTTGAGGTCTGAGGATTGGCTTGATGTTGTAGAGAAGGTTTCAGAGGAGTTGAAGGTGGAAAGGACAGAGGCCCAATGTAGGAATATGTTGgataaattgaaaaggaagtataagaaagagaagacaaaaatggatgaaatgGGGTTGAGCTCCAGTAAATGGGCTTATTTCAAGAAGATGGATATGTTGATGGCTTCATCAGCGAAACAAGAATATGGGCTTGCTTGTGGGGTTGATTCTGGCGAGTATGTGTTTATGAATACAAGGGTTTATTTAAACAGGTCGAATGGGTTTGATGAGATGACAGATAGTCCTGGGGAGTCAGAAACGTCTGAGGAGAATGATTCAGACGACCTTCCGAGGAGGAGGAAAGGGGTCGGAGATGATGATGAGGAGACTTCCTTTAGGGTGCTGGCAGATTCTATTCAAAAGTTTGGGaagatatatgaaaaaattgaaactagcAAGAGGCAGCAGATGATGGAGTTAGAGAAGATGAGGCTCGATTTCAATAGGGAGTTAGAGCAGCAGAAAAAGCAGATTTTGGAAAGGGCTCAGGTAGAAATTGCAAAAATACAGGAAGGGGAAGAGGAGGACACAGATGCTTCTGCAGAAAACCTCAGTGAATG 1061 0.3949 MDNIEDDARYPPKPYTLYRHNTSHRQKHSTRGAPYLPPINSRYAEEEEEEEYEELDGYEMENDQEEDEDDGENGYGGNFEDDDDFERNSKKRKLRNSSVLNYEFAPRVKFSQGNRNSADEWTEHATFVLLEVWGDKFLQLGRKSLRSEDWLDVVEKVSEELKVERTEAQCRNMLDKLKRKYKKEKTKMDEMGLSSSKWAYFKKMDMLMASSAKQEYGLACGVDSGEYVFMNTRVYLNRSNGFDEMTDSPGESETSEENDSDDLPRRRKGVGDDDEETSFRVLADSIQKFGKIYEKIETSKRQQMMELEKMRLDFNRELEQQKKQILERAQVEIAKIQEGEEEDTDASAENLSE 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00780 353 MobiDBLite consensus disorder prediction 259 276 - -
Bva04g00780 353 Gene3D - 121 183 - -
Bva04g00780 353 Pfam Myb/SANT-like DNA-binding domain 119 206 IPR044822 -
Bva04g00780 353 Coils Coil 48 68 - -
Bva04g00780 353 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 40 347 IPR044823 -
Bva04g00780 353 MobiDBLite consensus disorder prediction 1 92 - -
Bva04g00780 353 Coils Coil 163 194 - -
Bva04g00780 353 Coils Coil 304 335 - -
Bva04g00780 353 MobiDBLite consensus disorder prediction 44 79 - -
Bva04g00780 353 MobiDBLite consensus disorder prediction 241 276 - -
Bva04g00780 353 PANTHER ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE FAMILY PROTEIN 40 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00780 Bva-Chr4 5094852 5096446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00780 119 342 Trihelix Transcription Factor Family AT1G54060 31.343 3.58e-22 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva04g00780 Myb_DNA-bind_4 5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00780 - - gmx:100790166 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00780 04 5094852 5096446 Bva04g00780 04 5094852 5096446 ECH