Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00767 ATGGAGCAGAACAACGACGTTGTTGCACCATTCGTTATAAAGACTTATCAGATGGTCAACGATCCCGCCACTGATACTCTCGTCGTTTGGGGCAGAGCCAACAACAGCTTCATCATCATCGACCCCTTAGATTTCTCTCAGAGAATCTTGCCTGTATATTTCAAGCACAACAACTTCTCAAGCTTCGTTCGTCAGCTCAACACTTACGGGTTCAGGAAGGTTGATCCAGATCGCTGGGAGTTTGCGAACCAGTGGTTTCTTCGAGGGCAGAAGCATTTGTTGAAGAATGTAGTGAGGAGGAGGCACATGCAGAGGAATTCCAGTTCGTATTTTCAGGGGAAGCACGAGGAATTGGACGAGGAAGCCATAGTTATGGAGATAGCGAGGTTGAAGGAAGAGCAGAAGGCGTTGGAACATGAGCTTCATGGGATGAATAAGCGGTTGGAGGCGACGGAGAGACGACCACAGCAAATGATGGCGTTTCTCTGCAAGGTTGCCGACGACCCAGATGTTTTCTCTCGGATATTAATCGAGAGAGGCAAGAGGCAATTGTCCGGGGAGAAGAAGAGGCGCTTCATATCCCCACCATCCacttcctcctcctcttcctccGGTATGGCCGTGAAGAGGGAGCTTGACGACGAAGAACCAACCGCCGTTGGTGGAATAATCTCTTCGTCCTCGCCGGAGAATGGTTTTGAAATTGACAAGTTCTGCCAATCATCGTCGCCTGACGATACAGTCGCCGCCAATAATACCATGCCCGTCCCCGCTTGGTGGAATGATAAGTATACTATAATGGGTAGGTCTCGGATTGCTCAACAGGCTTATAATTGCGGCGATATTCCCACTCCGTTACCGGCGGTGTCGCCATATCTGGAGTGCGAAAATAATGGTAATGGGCAGTTATCCTATTTTACAGAAATGGCGGCGGAGACTGGGAGCAGTCGCCCGCCGCCTTATCCATTTTCGCTACTGGAGGGTGgctttta 992 0.4859 MEQNNDVVAPFVIKTYQMVNDPATDTLVVWGRANNSFIIIDPLDFSQRILPVYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANQWFLRGQKHLLKNVVRRRHMQRNSSSYFQGKHEELDEEAIVMEIARLKEEQKALEHELHGMNKRLEATERRPQQMMAFLCKVADDPDVFSRILIERGKRQLSGEKKRRFISPPSTSSSSSSGMAVKRELDDEEPTAVGGIISSSSPENGFEIDKFCQSSSPDDTVAANNTMPVPAWWNDKYTIMGRSRIAQQAYNCGDIPTPLPAVSPYLECENNGNGQLSYFTEMAAETGSSRPPPYPFSLLEGGF 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00767 330 Gene3D - 3 101 IPR036388 -
Bva04g00767 330 SUPERFAMILY "Winged helix" DNA-binding domain 8 100 IPR036390 -
Bva04g00767 330 Coils Coil 120 154 - -
Bva04g00767 330 ProSitePatterns HSF-type DNA-binding domain signature. 50 74 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva04g00767 330 PRINTS Heat shock factor (HSF) domain signature 62 74 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva04g00767 330 PRINTS Heat shock factor (HSF) domain signature 11 34 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva04g00767 330 PRINTS Heat shock factor (HSF) domain signature 49 61 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva04g00767 330 PANTHER HEAT STRESS TRANSCRIPTION FACTOR C-1 9 324 - -
Bva04g00767 330 MobiDBLite consensus disorder prediction 192 207 - -
Bva04g00767 330 SMART hsfneu3 7 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva04g00767 330 MobiDBLite consensus disorder prediction 221 235 - -
Bva04g00767 330 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 9 324 IPR027725 -
Bva04g00767 330 MobiDBLite consensus disorder prediction 186 235 - -
Bva04g00767 330 Pfam HSF-type DNA-binding 11 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00767 Bva-Chr4 5033321 5034601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00767 7 191 HSF AT3G24520 64.550 8.93e-84 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bva04g00767 HSF_DNA-bind 8.9e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00767 K09419 - jre:108979361 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00767 04 5033321 5034601 Bva04g00767 04 5033321 5034601 ECH