Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00760 ATGTCGACAGCGCCGTCTCCCGGAGCTGCTCCGGCACCCACTTCTCCGCCTGCTGCCAACACTACTTCTCCTCCGCCGGCGACTCCTTCTGCACCGCCTCCGTCAACACCAGCTGCGCCTCCCCCTGCTACTCCCTCTGCACCCCCACCTGCAACTCCTTCGGTCCCTCCACCGGCCTCTCCTTCACCTCCAGCCCCTACTTCGCCAACTCCTAGTCCTCCTCCTCCCTCATCTCCTTCACCCTCCACGCCGTCAACTACTCCGCCGCCGGAATCTTCAGTCTCTCCCCCGCCTCCGTCGAGCTCAGACTCGCCTTCAACTCCCACTCCCAGTCCACCTAGTCCCGCATCGAGGAGCTCCCCGCCGCCTCCGTCGAGCTCAGGCTCTCCTTCAACTCCAAATCGAAGCCCTCCTCCACCTCGTTCTTCGTCAGCATCCCCGTCGCCTCCATCATCGTCGAGTATATCAACTGGAGTCGTTGTCGGAATTGCCGTTGGGGCAGCGGCGATTCTTTTAGTGTTGAGTATTTTGTGCATATGTTgtaggaagaaaaagagaagacgTGACGAGGAATACTATATGCCGCCACCACCACCGCGGGCGCCTAAAGATGATCCATATGGTGGCCCACCACGTCAGTGGCAGCATAAtgctcctcctcctccttctgATCATGTTGTCTCTGTGATACCAAAGCCAACGCCTCCACCACCAGTTGCACCGAAACCAACCCTACCACCAGTTTATGTTCCTCAACCTCCGCCACCGCCACCTTTCGTGGGCAGCAGTGGTGGTTCTGGCTCCAACTATTCTGGTTATGAAAATCCCCTTCCGCCTCCTTCTCCAGGCACTTTCTTGGGCCTTCCAAAGAGCACGTTTACATATGAGGAGTTGGCACGGGCAACTGATGGCTTCTCTGATGCCAACCTCCTTGGACAAGGTGGATTTGGGTATGTGCACAGAGGAATTCTTCCAAACGGGAAGGAGGTAGCTGTCAAGCAGCTAAAGGCTGGAAGTGGGCAGGGAGAACGTGAATTTCATGCAGAAGTAGAAATAATCAGCCGAGTTCATCACAAGCATCTTGTTTCTTTGGTTGGATATTGCATCACCGGGGCAAAGAGGCTGCTTGTTTATGAATTTGTCCCAAACAACACATTAGAGTTCCACTTGCATGGAAAAGGGCGACCTACCATGGATTGGCCTACCAGACTGAGAATTGCTTTAGGATCTGCCAAAGGATTGGCATATCTTCACGAGGATTGTCATCCTAAGATCATCCATCGTGATATCAAAGCTGCTAATATACTTCTGGATTTTAACTTCGAAGCAAAGGTTTCAGATTTTGGGCTCGCAAAGTTTACTTCTGATGTCAATACTCACGTCTCCACCAGAGTGATGGGAACTTTTGGGTATCTGGCTCCAGAATACGCTTCAAGTGGAAAACTCACTGACAAATCAGATGTATTTTCCTTTGGAGTTATGCTCCTGGAGTTAATTACGGGACGGCGACCAGTTGACTCCAGTCATACTTTCATGGAGGATAGCTTAGTAGACTGGGCAAGGCCAGTGCTAACACGTGCCTTGGAAGATGAGAACTTTGATTCTCTGGTTGATCCAAGGCTTCAAAACGAATATGAACTCAACGAGATGGCTCGCATGGTGGCTTGCGCTGCAGCTTGCATACGTCATTCAGCTCGTCGTCGACCAAGGATGAGCCAGGTTGTTCGTGCTCTGGAAGGAGATATGTCTCTAACAGATCTCAACGAGGGAATTAGGCCTGGACACAGCACTGTGTACAGCTCCCATGGAAGCTCAGATTATGACACTGTACAGTACAAGGAGGACATGAAAAAGTTCAGGAAAATAGCGTTGGGAACTCAAGAGTATGGCGCCAGCAGCGAATACAGTGGTGGACCTACGAGTGAGTATGGTTTATATCCATCTGGTTCCAGCAGTGAAGGGCAGACCACCAGGGAAATGGAGATGGGaaagatgaagagaaataGTCAAGGTTTCGGTGGAGGCTCTTATcctctata 2039 0.5022 MSTAPSPGAAPAPTSPPAANTTSPPPATPSAPPPSTPAAPPPATPSAPPPATPSVPPPASPSPPAPTSPTPSPPPPSSPSPSTPSTTPPPESSVSPPPPSSSDSPSTPTPSPPSPASRSSPPPPSSSGSPSTPNRSPPPPRSSSASPSPPSSSSISTGVVVGIAVGAAAILLVLSILCICCRKKKRRRDEEYYMPPPPPRAPKDDPYGGPPRQWQHNAPPPPSDHVVSVIPKPTPPPPVAPKPTLPPVYVPQPPPPPPFVGSSGGSGSNYSGYENPLPPPSPGTFLGLPKSTFTYEELARATDGFSDANLLGQGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFHAEVEIISRVHHKHLVSLVGYCITGAKRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLRIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFNFEAKVSDFGLAKFTSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELITGRRPVDSSHTFMEDSLVDWARPVLTRALEDENFDSLVDPRLQNEYELNEMARMVACAAACIRHSARRRPRMSQVVRALEGDMSLTDLNEGIRPGHSTVYSSHGSSDYDTVQYKEDMKKFRKIALGTQEYGASSEYSGGPTSEYGLYPSGSSSEGQTTREMEMGKMKRNSQGFGGGSYPL 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00760 679 MobiDBLite consensus disorder prediction 213 261 - -
Bva04g00760 679 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Bva04g00760 679 MobiDBLite consensus disorder prediction 630 658 - -
Bva04g00760 679 SUPERFAMILY Protein kinase-like (PK-like) 280 578 IPR011009 -
Bva04g00760 679 Pfam Protein tyrosine and serine/threonine kinase 310 578 IPR001245 GO:0004672|GO:0006468
Bva04g00760 679 SMART serkin_6 305 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00760 679 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 109 662 - -
Bva04g00760 679 ProSiteProfiles Protein kinase domain profile. 305 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00760 679 MobiDBLite consensus disorder prediction 1 156 - -
Bva04g00760 679 MobiDBLite consensus disorder prediction 630 679 - -
Bva04g00760 679 PRINTS Proline rich extensin signature 17 33 - -
Bva04g00760 679 PRINTS Proline rich extensin signature 38 50 - -
Bva04g00760 679 PRINTS Proline rich extensin signature 53 74 - -
Bva04g00760 679 PRINTS Proline rich extensin signature 3 15 - -
Bva04g00760 679 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 109 662 - -
Bva04g00760 679 MobiDBLite consensus disorder prediction 187 284 - -
Bva04g00760 679 CDD STKc_IRAK 311 580 - -
Bva04g00760 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Bva04g00760 679 MobiDBLite consensus disorder prediction 9 146 - -
Bva04g00760 679 Gene3D Phosphorylase Kinase; domain 1 282 380 - -
Bva04g00760 679 Gene3D Transferase(Phosphotransferase) domain 1 381 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00760 Bva-Chr4 4972923 4976812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00760 112 637 Trihelix Transcription Factor Family AT1G70460 49.434 5.50e-168 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bva04g00760 PK_Tyr_Ser-Thr 3.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00760 - - zju:107431789 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00760 04 4972923 4976812 Bva04g00760 04 4972923 4976812 ECH