Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00756 aTGCTATCGCGCTGTATCCTCCTCCAATTGCCTTTGTCTCAAAATCTGACCTTTGACGAAGCTCAGCTCTCTAAACCCTTCCAAATTCACAATCTGCATCCAAGTTCAACCACTCCTTTATCAGCAGACCTTCAACACTTCTCCCACCTTCCCAGATTCTCCATATTGGTTTTGTTAACATTTTTCAGTAATCTTCGCTTTAGGATCCATAACCGTAGAACCCACTATCGGAGCAATAGCTGCAATGCTTTTAAGGATTCCGGCGAAGAAACTAAGGTGGTCTTAGACTCAGATGGAGGTGATAACGGTGGAGGTGGAGGCAGCGGTGGCGGCGGTGGAGGCGAAGGTGATGAGCAGGTGGAGAAAAAAGATCGATATTCGGGGCCTTTGCCAGATTGGTTGAATTTTACTTCTGATGACGCAAAGACAGTCTTTGCAGCACTCGCAATATCGCTTGCGTTTCGGTCGTTCGTGGCCGAGCCGAGGTACATTCCTTCGTTGTCAATGTATCCTACATTTGATGTTGGAGATCGAATTGTTGCAGAAAAGCCCTCCAGCACTTCCACTGATGATGATGTCTTCATAAAACGAGTGGTTGCAAAGCAAGGTGATATTGTTGAAGTTCGTAAAGGGCACCTCATAGTTAATGGGGTTGAAAGAAGTGAAAATTTCATCTATGAACCACCTTCTTATGACATGAAACCTATTCGTGTACCAGAGAACCATGTGTTTGTTATGGGAGATAACCGCAATAACAGCTATGATTCCCATGTTTGGGGTCCCTTGCCAGTCAGGAATATTATAGGGAGATCAATACTTCGCTATTGGCCACCAAACAGGATTGGCGGCACAGTACTAGGAGGTTGTGCTGTTGATGACAAGCAGGAGACAAGTCAACCAACTCAATG 908 0.4537 MLSRCILLQLPLSQNLTFDEAQLSKPFQIHNLHPSSTTPLSADLQHFSHLPRFSILVLLTFFSNLRFRIHNRRTHYRSNSCNAFKDSGEETKVVLDSDGGDNGGGGGSGGGGGGEGDEQVEKKDRYSGPLPDWLNFTSDDAKTVFAALAISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKPSSTSTDDDVFIKRVVAKQGDIVEVRKGHLIVNGVERSENFIYEPPSYDMKPIRVPENHVFVMGDNRNNSYDSHVWGPLPVRNIIGRSILRYWPPNRIGGTVLGGCAVDDKQETSQPTQ 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00756 302 SUPERFAMILY LexA/Signal peptidase 155 284 IPR036286 -
Bva04g00756 302 PRINTS Bacterial leader peptidase 1 (S26A) family signature 157 173 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bva04g00756 302 PRINTS Bacterial leader peptidase 1 (S26A) family signature 238 257 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bva04g00756 302 ProSitePatterns Signal peptidases I serine active site. 166 173 IPR019756 GO:0004252|GO:0016021
Bva04g00756 302 Gene3D Umud Fragment, subunit A 166 275 - -
Bva04g00756 302 PANTHER SIGNAL PEPTIDASE I 121 185 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bva04g00756 302 PANTHER SIGNAL PEPTIDASE I 190 285 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bva04g00756 302 ProSitePatterns Signal peptidases I signature 3. 243 256 IPR019758 GO:0004252|GO:0016021
Bva04g00756 302 CDD S26_SPase_I 160 270 IPR019533 GO:0004252|GO:0006465
Bva04g00756 302 Pfam Signal peptidase, peptidase S26 141 276 IPR019533 GO:0004252|GO:0006465
Bva04g00756 302 PANTHER THYLAKOIDAL PROCESSING PEPTIDASE 2, CHLOROPLASTIC-RELATED 121 185 - -
Bva04g00756 302 PANTHER THYLAKOIDAL PROCESSING PEPTIDASE 2, CHLOROPLASTIC-RELATED 190 285 - -
Bva04g00756 302 MobiDBLite consensus disorder prediction 93 124 - -
Bva04g00756 302 TIGRFAM sigpep_I_bact: signal peptidase I 142 278 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00756 Bva-Chr4 4962460 4964468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00756 176 277 MADS-box Gene Family AT1G29960 31.373 1.69e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00756 K03100 - jre:108980416 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00756 04 4962460 4964468 Bva04g00756 04 4962460 4964468 ECH