Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00742 ATGAATAGAGCTGTTCTTCAGAGCACACCGGTGCAACAAATGATGGCCGGAAACCCTAACTGGTGGAACATCAATAGCATGAGACCACCTACTCATCAACAAGCTTCTCCTTTCTTGTCTACTCCTTCAAACTTTCTTTCTCCATATGCAcccacttcttcttcttcacttcCTTTCCCTTCTTGGCATCATGACAGCCAAGAACAGCTTCCAGCTGAGTCCTGGAGCCAACTTCTCATgGGTGGACTGGTGGCTGAGGAAGATAAGGGAGGTATGGGCCAGATTCAGGTTAAGAAGTTGGAGAGCTGGGAGGAACAGATGCTAACTCAGGACCCGAATGCTCCTCTTGTTGATGTCAAGAAAGAGAATTCTGTAAACGGCTATGTGTACGGACATGGAAACGAAGAATTTCAGGCAGTTAAACCAGCTTGGTCTCAAATAGTGCcatgttcttcttcttcttctccaaaatCTTGTGTGAGTAGTTTCAGCAACAACATGTTGGATTTCTCCAACAGTAAGACCGATGTGAAGCACCCTCCCCCAGATCGATCATCTGAGTGCAACAGCACTGCAGCAGCAGGTGGGGCACTCAAGAAAGCTAGGGTTCAACCATCGACAAGTCAGTCTACCTTCAAGGTTAGGAAGGAGAAATTAGGTGATAGAATTACAGCCCTTCATCAGCTAGTTTCCCCATTTGGGAAGACTGACACGGCTTCTGTCTTGTTAGAAGCTATTGGGTATGTCAGATTCCTTCAGAATCAAATCGAGGCCCTTAGCTTACCATACCTAGGCAGTGGATCAGGAAACATGAGGCAGCAGCAGaagcagcagcaacaacaatctGTTCAAGCAGAGAAGTATTGTATATTCCCAGAAGACCCTGGTCAGTTGCTGAATGAAAACTGCTTGAAGAGGAAAGCAGCTAGTGAGCAGgaTTCTCATGAAGAACCAAAGAAGGATCTGAGGAGTAGAGGGTTGTGTCTGGTTCCAGTGTCATGCACACTGCAAGTTGGAAGTGACAATGGAGCAGACTATTGGGCTCCGGCGCTCGGCGGCGGCTTCCGATA 1070 0.4439 MNRAVLQSTPVQQMMAGNPNWWNINSMRPPTHQQASPFLSTPSNFLSPYAPTSSSSLPFPSWHHDSQEQLPAESWSQLLMGGLVAEEDKGGMGQIQVKKLESWEEQMLTQDPNAPLVDVKKENSVNGYVYGHGNEEFQAVKPAWSQIVPCSSSSSPKSCVSSFSNNMLDFSNSKTDVKHPPPDRSSECNSTAAAGGALKKARVQPSTSQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYVRFLQNQIEALSLPYLGSGSGNMRQQQKQQQQQSVQAEKYCIFPEDPGQLLNENCLKRKAASEQDSHEEPKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPALGGGFR 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00742 356 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 16 342 - -
Bva04g00742 356 Gene3D - 209 287 IPR036638 GO:0046983
Bva04g00742 356 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 213 263 IPR036638 GO:0046983
Bva04g00742 356 CDD bHLH_AtbHLH_like 211 260 IPR045239 -
Bva04g00742 356 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 203 252 IPR011598 GO:0046983
Bva04g00742 356 PANTHER OS05G0228400 PROTEIN 16 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00742 Bva-Chr4 4880330 4884099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00742 1 298 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 42.706 2.68e-68 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00742 - - gmx:100785156 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00742 04 4880330 4884099 Bva04g00742 04 4880330 4884099 ECH