Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00740 ATGGCTTCTCACCCTCAGAAGAATGATGATGATGCAGAAACTAAGTCTGGGTGCCTTTATGTAAAAGTCAGTATGGACGGGGCACCATACTTGAGGAAAGTGGATCTCAAAAACTTTAAGAGTTACAAGGAACTCTCATCAGCACTAGAAAAGATGTTTAGTTGTTTTACAATCAGTCAATGCTGCACCCATGGAGTTTCTTGTAAAGATAATTTGAGTGAAAGTAGACTGAAGGATCTCCTTCACGGTTCAGAATATGTTCTAACTTACGAGGACAAGGATGGTGATTGGATGCTGGTTGGTGATGTTCCCTGGCTGATGTTCATTGATTCTTGCAAGAGATTAAGGATAATGAAGAGTTCTGAAGCAGCAATTGGACTAGCACCAAGAGCCATGGAGAAGTGCAGAAGTGGCAACTA 419 0.4153 MASHPQKNDDDAETKSGCLYVKVSMDGAPYLRKVDLKNFKSYKELSSALEKMFSCFTISQCCTHGVSCKDNLSESRLKDLLHGSEYVLTYEDKDGDWMLVGDVPWLMFIDSCKRLRIMKSSEAAIGLAPRAMEKCRSGN 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00740 139 Pfam AUX/IAA family 7 130 IPR033389 -
Bva04g00740 139 Gene3D - 12 129 - -
Bva04g00740 139 ProSiteProfiles PB1 domain profile. 18 120 IPR000270 GO:0005515
Bva04g00740 139 SUPERFAMILY CAD & PB1 domains 15 119 - -
Bva04g00740 139 PANTHER AUXIN-INDUCED PROTEIN 1 132 - -
Bva04g00740 139 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 132 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00740 Bva-Chr4 4862672 4865658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00740 2 122 B3 DNA Binding Superfamily AT2G46530 32.231 9.39e-10 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bva04g00740 AUX_IAA 1.1e-64 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00740 K14484 - gmx:100803754 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00740 04 4862672 4865658 Bva04g00740 04 4862672 4865658 ECH