Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00736 ATGGAGCGGATCGTCGGCGGCAAGTACAAGCTCGGCCGCAAGATCGGAAGTGGTTCCTTCGGTGAAATTTATCTCGCCACGCATACTGACAGCTTCGAGATAGTCGCTGTAAAGATTGAGAACACCAGAACAAAGCATCCACAGCTGCTTTATGAGGCAAAACTGTACAATATTCTTCAAGGAGGAAGTGGTATTCCAAGCATAAAATGGTCTGGCGTAGATGGGGAGGACAATGTGCTCGTTCTCGATTTGCTGGGACCAAGTCTTGAGGATCTCTTTGTGTATTGTGGAAGAAAGTTTTCGTTGAAGACAGTATTAATGCTGGCTGATCAAATGATCACCAGAATAGAATATGTGCATTCTAAGGGTTTTTTACATAGAGATATAAAACCTGATAACTTTCTCATGGGACTTGGTCGGAAGGCTAACCAGGTTTACATGATTGATTTTGGGCTTGCTAAAAGATATCGGGACTCCACAACCAACCGCCACATCCCTTACAGGGAGAACAAAAACCTAACAGGCACTGCACGTTATGCAAGTTGCAATACTCATCTTGGGATTGAGCAAAGCCGACGGGATGATTTGGAGTCATTAGGATATGTGCTTCTGTACTTCCTGAGAGGAAGCCTTCCTTGGCAAGGTCTAAAAGCTGCAACAAAGAAGCAAAAGTATGATAAAATATGTGAGAAGAAAGTATCAACTCCTATTGAGGTCCTATGCAAATCTCATCCTGTGGAGTTTGCTTCATACTTCCATTACTGCCACTCTCTAACTTTTGATCAGCGACCTGATTATGGATTCTTGAAGCGTGTATTTCGTGACCTATTTTCTCGAGAAGGTTATGAATTTGATTATGTGTTTGATTGGACCATCCTAAAGTACCAGCAGGCACAAAAGAACAGAGTTCAGCCTGGCATATCACTGGTTCCCCATGCAAGCAGCAGTCGGGCAATGGCAATTGAAGGAGAGACCCATCAAGATGTCTCAGAGCGCATTAGGTCGGCCAATGCAAGTGGTTCTGGTGTAAAAATGCACTTCAAATCACCAGTGGGGAAAAACTTGAGTTCTGATAATCCTCTTGACAAGAATATTTTTGGAGAAGCAAATATGCCGTCTACTTCATATGCACTTGCTGGTTCGTCAAAGAGGAACTCCTTAAAGCCTGGCTTATCCAGTGATGCTGCCAACACTGGACAGGGGCAAGGCAGTAAGGTTGGCCCTTCAAGTAGCTGGATTTCATCTCTGCAGCGCATATCTTCTGCCAAATG 1271 0.4414 MERIVGGKYKLGRKIGSGSFGEIYLATHTDSFEIVAVKIENTRTKHPQLLYEAKLYNILQGGSGIPSIKWSGVDGEDNVLVLDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYMIDFGLAKRYRDSTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLKRVFRDLFSREGYEFDYVFDWTILKYQQAQKNRVQPGISLVPHASSSRAMAIEGETHQDVSERIRSANASGSGVKMHFKSPVGKNLSSDNPLDKNIFGEANMPSTSYALAGSSKRNSLKPGLSSDAANTGQGQGSKVGPSSSWISSLQRISSAK 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00736 423 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00736 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Bva04g00736 423 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Bva04g00736 423 PANTHER CASEIN KINASE 1-LIKE PROTEIN 3 1 408 - -
Bva04g00736 423 PANTHER CASEIN KINASE-RELATED 1 408 - -
Bva04g00736 423 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00736 423 MobiDBLite consensus disorder prediction 340 423 - -
Bva04g00736 423 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Bva04g00736 423 MobiDBLite consensus disorder prediction 352 423 - -
Bva04g00736 423 Gene3D Transferase(Phosphotransferase) domain 1 1 339 - -
Bva04g00736 423 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00736 423 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00736 Bva-Chr4 4829063 4834420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00736 9 215 EF-hand Containing Proteins AT4G23650 29.577 9.57e-15 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Bva04g00736 Pkinase 6.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00736 K08960 - gmx:100800342 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00736 04 4829063 4834420 Bva04g00736 04 4829063 4834420 ECH