Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00733 ATGGGTTGTGTTTATTCAAGGGTTTGTATTGGTGATATTTGTTCTCCGAGTGATTCTAGACCTAATGATGGGCAAAATGCAAGAGCAGGTGGAGTTGCCGTGTTCTCTCCTGCCTCTTCAGACCTTCAAGAAGGTGAAATTCGTGATCAGTTGAACCAATTGAGTTTAACCAGAGACTCTGAAGCAGGCATCAGGAGGCTAGCTAGGGTTTCGGCGCAGTTTCTACCTCCTGATGGCTCGCGAACCATTAAGGTTCCTTCAGGGAAGTATGAATTGCGTTATTCCTACTTATCGCAGAGAGGATATTACCCTGATGCTCTTGATAAGGCTAACCAAGACAGTTTTGCCATTCACACACCGTTTGGGACCAACCCCGATGATAATTTCTTTGGGGTTTTCGATGGACATGGAGAATTCGGAGCACAGTGTTCACAGTTTGTGAAGCGAAAGTTGTGTGAGAATTTGCTTAGGAATAGTAGATTTCATGTAGACCCTGTGGAGGCCTGTCACGCGGCGTTCTTGGCCACAAACACACAGTTGCAAGCTGATATTTTAGATGATAGTATGAGTGGTACTACTGCAATTACAGTATTGGTTCGTGGTAGGACTCTATATGTAGCTAATTCTGGTGATTCTAGGGCAGTTATTGCAGAGAGGAGGGGGAAAGATGTTGTGGCAGTTGATTTATCCATTGATCAAACACCTTTTAGGCCTGATGAACTGGAAAGAGTCAAGCTTTGTGGGGCCCGAGTTCTTACGCTAGATCAGATTGAAGGGCTAAAGAACCCTGATGTTCAATGTTGGGGCACCGAAGAGGGAGATGACGGTGACCCGCCGAGGCTGTGGGTGCCGAATGGCATGTACCCTGGTACAGCTTTCACGAGAAGTATAGGTGATTCTATTGCAGAGAGCATTGGGGTTGTGGCTACCCCTGAAATTGTTGTTTTTGAGCTCACAGCAAACCATCCTTTCTTTGTACTCGCCAGTGATGGGGTATTCGAGTTTCTATCTAGCCAGACTGTTGTTGAAATGGTTGCAAAATTCAAAGATCCTCGTGATGCTTGTGCTGCAATTGTTGCTGAATCGTATCGACTTTGGTTACAGTATGAAACTCGTACAGATGATATTACAGTCATCATTGTGCATATCAATGGGCTAACTGATTCTGTCGTTAGTCAATCAGCTAGTTATGATGATACCTTCCGAAACCCAGTGCCTCAAGTTGTTGAGGTGACAGGATCAGAATCTCCTTCCTCCTTTGGTTGGAATTCAAGGAACCATCGTGTAAGGCATGACTTATCAAGGGCACGCCTTCGGGCAATTGAAAATTCCCTGGACAATGGGCAAGCTTGGGTTCCTCCATCTCCAGCCCACAGGAAAACATGGGAGGAAGAAGCACACATTGAGCAGGCATTGCGTGATCACTTTCTATTCCGAAAACTAACAGATTCTCAGTGTCATGTTTTATTGGATTGCATGCAAAGAGTTGAGGTCCAACCTGGGGATGTTATAGTCAAACAGGGTGGTGAAGGTGACTGCTTTTATGTTGTTGGAAGTGGAGAATTTGAAGTCACGACTAGTCAGGAAGAACAAAATGGGGAAGTACCTAAAGTTTTGCAGCGCTACACTGCTGAAAAATTATCATGCTTTGGAGAACTCGCTCTAATGTATAATAAACCACTCCAGGCCTCTGTGCGTGCTGTAACCAAAGGAACTCTCTGGGCTTTAAAGCGGGAAGATTTTCGAGGAATTCTAGTGTCagaattttctaatttatcatCCTTAAAGTTGCTTCGGTCTGTAGATCTCCTCTCAAGGTTGACTATCTTACAACTTAGTCAGATTTCAGACTCTCTTTCTGAAGTTTCATTCTCACGTGGGCAGAAAATAGTTGATAACAATGAAGCTCAAGCATTGTACATCATCCAGAAAGGACAAGTGAAAATCACTTTTGACGCAGATCTGCTGGAAAGTCCAAATGCCTCCAGTCTCAAGCCCgacaatcaaaatgaagatgataaTTTACAGAGCAGAAAAGAGCTGTCAGTAGAGAAGCCTGAGGGAAGCTACTTTGGTGAATGGGCACTTCTTGGTGAACAGATTGGTTCTTTAAGTGCTGTTGCCATGAGTGATGTTATATGTGCTGTActaacaaaggaaaaatttgaATCTGTAATTGGTCCcttaaaaaagttttctcaGGAAGATCATAAGTCAAGGCACAATTCCTCAGACTTCTCCATGGAAACAACTAAAAGCTTTGATTTGTCATCCCTGGAGAAAGTCCAGCTCTCTGATTTGGAATGGAGGAAGTGTCTATATTCCACTGACTGCTCTGAGGTTGGACTTGTACATTTTAGAGAATCTGAAAATTCTCTTACTTTAAAGAGATTTTCTAAGGAAAAGGTGAAAAGGCTAGGAAAGGAGGCACAAGTTTTCAAAGAGAGAAACTTGATGAAGAGTACGAGCCCTTCAGCTTGTATACCGAAGGTTCTTTGCACTTGTGCTGATCAAGTATATGCTGGGATACTGCTAAATACACGCCTTGCTTGCCCTTTGTCTTCTATACTTACTAGTCCTTTTGGTGAATTGTCAGCACGTTTTTGTGCTGCTTCTGTGATTACTGCCTTAGAAGACTTGCACAAGAATGGTGTTATCTACAGAGGTGTGTCACCTGATGTTTTGATGTTGGACCAAACAGGACATATACAGCTAGTGGACTTTAGATTTGGGAAGCAACTCTCAGGTGAGAGAACATTCACAATTTGTGGGATGGCTGACTCATTAGCTCCGGAGATTATTCTGGGAAAAGGCCATGGTTTCCCCGCTGACTGGTGGGCATTGGGAGTTCTGATTTACTTTATGTTACAGGGCGAGATGCCCTTTGGATCATGGAGAGAAAATGAGCTTGATACAGTCGCCAAAATTGCAAAACGGAAGCTAAAAGTTCCAGAGACTTTCGGCCCTGAAGCCATTGATCTGATCACCAAGTTACTTGACGTTGAGGAAAACACTAGACTTGGTAGCCAAGGTCCTGCCTCTGTCAAAAGTCATTCATGGTTCAGTGGTGTTGAATGGGAAGGGATTAGAAACCGTAGTTTTCCTGTTCCTCCAGAAATTATTTCTCGCATAGCACAATACTTGGAAACACATTCTGAGGATTGCACTGCTTCTCAAGGTTCCCCACCTCGGCATGTGGAAGAACTTAATGTTCCTGAATGGCTTGAGGACTGGTA 3236 0.4302 MGCVYSRVCIGDICSPSDSRPNDGQNARAGGVAVFSPASSDLQEGEIRDQLNQLSLTRDSEAGIRRLARVSAQFLPPDGSRTIKVPSGKYELRYSYLSQRGYYPDALDKANQDSFAIHTPFGTNPDDNFFGVFDGHGEFGAQCSQFVKRKLCENLLRNSRFHVDPVEACHAAFLATNTQLQADILDDSMSGTTAITVLVRGRTLYVANSGDSRAVIAERRGKDVVAVDLSIDQTPFRPDELERVKLCGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAESIGVVATPEIVVFELTANHPFFVLASDGVFEFLSSQTVVEMVAKFKDPRDACAAIVAESYRLWLQYETRTDDITVIIVHINGLTDSVVSQSASYDDTFRNPVPQVVEVTGSESPSSFGWNSRNHRVRHDLSRARLRAIENSLDNGQAWVPPSPAHRKTWEEEAHIEQALRDHFLFRKLTDSQCHVLLDCMQRVEVQPGDVIVKQGGEGDCFYVVGSGEFEVTTSQEEQNGEVPKVLQRYTAEKLSCFGELALMYNKPLQASVRAVTKGTLWALKREDFRGILVSEFSNLSSLKLLRSVDLLSRLTILQLSQISDSLSEVSFSRGQKIVDNNEAQALYIIQKGQVKITFDADLLESPNASSLKPDNQNEDDNLQSRKELSVEKPEGSYFGEWALLGEQIGSLSAVAMSDVICAVLTKEKFESVIGPLKKFSQEDHKSRHNSSDFSMETTKSFDLSSLEKVQLSDLEWRKCLYSTDCSEVGLVHFRESENSLTLKRFSKEKVKRLGKEAQVFKERNLMKSTSPSACIPKVLCTCADQVYAGILLNTRLACPLSSILTSPFGELSARFCAASVITALEDLHKNGVIYRGVSPDVLMLDQTGHIQLVDFRFGKQLSGERTFTICGMADSLAPEIILGKGHGFPADWWALGVLIYFMLQGEMPFGSWRENELDTVAKIAKRKLKVPETFGPEAIDLITKLLDVEENTRLGSQGPASVKSHSWFSGVEWEGIRNRSFPVPPEIISRIAQYLETHSEDCTASQGSPPRHVEELNVPEWLEDW 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00733 1078 Gene3D Phosphorylase Kinase; domain 1 765 851 - -
Bva04g00733 1078 Pfam Protein kinase domain 779 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00733 1078 SMART PP2C_4 85 381 IPR001932 -
Bva04g00733 1078 SUPERFAMILY cAMP-binding domain-like 442 585 IPR018490 -
Bva04g00733 1078 CDD CAP_ED 477 585 IPR000595 -
Bva04g00733 1078 SUPERFAMILY PP2C-like 82 385 IPR036457 -
Bva04g00733 1078 Gene3D - 86 384 IPR036457 -
Bva04g00733 1078 ProSiteProfiles PPM-type phosphatase domain profile. 93 383 IPR001932 -
Bva04g00733 1078 Gene3D Jelly Rolls 591 744 IPR014710 -
Bva04g00733 1078 SUPERFAMILY cAMP-binding domain-like 595 728 IPR018490 -
Bva04g00733 1078 ProSiteProfiles Protein kinase domain profile. 767 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00733 1078 ProSiteProfiles cAMP/cGMP binding motif profile. 603 728 IPR000595 -
Bva04g00733 1078 Pfam Protein phosphatase 2C 119 362 IPR001932 -
Bva04g00733 1078 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 36 1078 - -
Bva04g00733 1078 Pfam Cyclic nucleotide-binding domain 622 726 IPR000595 -
Bva04g00733 1078 Pfam Cyclic nucleotide-binding domain 496 585 IPR000595 -
Bva04g00733 1078 CDD CAP_ED 603 735 IPR000595 -
Bva04g00733 1078 CDD PP2Cc 109 383 IPR001932 -
Bva04g00733 1078 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Bva04g00733 1078 ProSiteProfiles cAMP/cGMP binding motif profile. 477 585 IPR000595 -
Bva04g00733 1078 Gene3D Jelly Rolls 444 585 IPR014710 -
Bva04g00733 1078 SUPERFAMILY Protein kinase-like (PK-like) 747 1054 IPR011009 -
Bva04g00733 1078 PRINTS cAMP-dependent protein kinase signature 513 527 - -
Bva04g00733 1078 PRINTS cAMP-dependent protein kinase signature 548 557 - -
Bva04g00733 1078 PRINTS cAMP-dependent protein kinase signature 722 734 - -
Bva04g00733 1078 PRINTS cAMP-dependent protein kinase signature 498 512 - -
Bva04g00733 1078 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 36 1078 - -
Bva04g00733 1078 SMART serkin_6 774 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00733 1078 Gene3D Transferase(Phosphotransferase) domain 1 852 1037 - -
Bva04g00733 1078 SMART cnmp_10 477 600 IPR000595 -
Bva04g00733 1078 SMART cnmp_10 603 741 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00733 Bva-Chr4 4804363 4813044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00733 1 1078 PP2C-type Phosphatase Gene Family AT2G20050 69.498 0.0 1544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Bva04g00733 Pkinase 2.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00733 - - gmx:100799821 1828.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00733 04 4804363 4813044 Bva04g00733 04 4804363 4813044 ECH