Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00722 ATGGCTGAGCTCCTGTGCTCAGAGGCAGAGACAACTAGTCCCAACTGCTTCCCACAGTCTCCATCTTCGCCGTCATCGTCTGGTTCTGGGTCATCTCAATCTTCGCAGAATTCCAGTTTTAAAACAGGCCCGGAACTGGAAGAGAGGAAGGCCAAGCGAGCTAGAGATAGCAGCAAGCACCCGGTTTACAGAGGAGTCCGAATGCGGGCATGGGGCAAGTGGGTATCCGAAATCCGTGAGCCCCGAAAGAAGAATCGGATCTGGCTCGGCACCTTCGCCACGCCGGAGATGGCAGCTCGTGCCCATGACGTGGCCGCACTAAGTATAAAAGGCAACTCGGCCATCCTTAACTTCCCTGAGTTAGCGGGTTCCCTGCCCCGACCCCCTTCTAACTCGCCGCGGGATGTTCAAGCTGCAGCCGCAAAAGCCGCTGCAATGGAAATCTTCAACCCCACGACGACATCGTCGCCTTCTCTGTCTCCTTCATCGTCGTCATCGTCGTTGTCGCAGTCTTCCTTTTCTCTGTCATTGGCAGTATCTAGCTCCGACGACCCGTCGACCCCAGAAGAGCTCGGTGAGATTGTGGAGCTTCCGGCTCTCGGAACCAGTTTCGAATCACCCGACCCGAGTAGCGATTTCGTGTTCGTTGACCCGGTGGATGGGTGGCTCTATCCTCACCCATGGTATCACACCATCTATGATGACAAGGATTGCGGTGCCTATTTCACAGCGGATCAGATATCTATGCAAGAGGCAGAGAGTTTGATTCTTTGTGGCCTTGAGGGTTCATTGTGGCAACACTA 803 0.5467 MAELLCSEAETTSPNCFPQSPSSPSSSGSGSSQSSQNSSFKTGPELEERKAKRARDSSKHPVYRGVRMRAWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAALSIKGNSAILNFPELAGSLPRPPSNSPRDVQAAAAKAAAMEIFNPTTTSSPSLSPSSSSSSLSQSSFSLSLAVSSSDDPSTPEELGEIVELPALGTSFESPDPSSDFVFVDPVDGWLYPHPWYHTIYDDKDCGAYFTADQISMQEAESLILCGLEGSLWQH 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00722 267 MobiDBLite consensus disorder prediction 43 61 - -
Bva04g00722 267 Pfam AP2 domain 61 111 IPR001471 GO:0003700|GO:0006355
Bva04g00722 267 SUPERFAMILY DNA-binding domain 62 120 IPR016177 GO:0003677
Bva04g00722 267 PRINTS Ethylene responsive element binding protein signature 63 74 IPR001471 GO:0003700|GO:0006355
Bva04g00722 267 PRINTS Ethylene responsive element binding protein signature 85 101 IPR001471 GO:0003700|GO:0006355
Bva04g00722 267 Gene3D AP2/ERF domain 62 120 IPR036955 GO:0003700|GO:0006355
Bva04g00722 267 ProSiteProfiles AP2/ERF domain profile. 62 119 IPR001471 GO:0003700|GO:0006355
Bva04g00722 267 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 20 266 - -
Bva04g00722 267 MobiDBLite consensus disorder prediction 8 42 - -
Bva04g00722 267 SMART rav1_2 62 125 IPR001471 GO:0003700|GO:0006355
Bva04g00722 267 CDD AP2 63 121 IPR001471 GO:0003700|GO:0006355
Bva04g00722 267 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 20 266 - -
Bva04g00722 267 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00722 Bva-Chr4 4750982 4752213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00722 35 239 AP2-EREBP Transcription Factor Family AT5G11590 59.903 1.10e-68 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva04g00722 AP2 6.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00722 K09286 - gmx:100778201 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00722 04 4750982 4752213 Bva04g00722 04 4750982 4752213 ECH