Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00707 ATGGAACCCACGGACGATGACGACGACCGGCAACTCCGACGACTCGACTCGGTCCCCAGCACCGACTCGATGTCCACGAGTTCGGGGTCAACCTTGTCGTCCGTGCTTAGCAGTGAGGATTTCCGGAGGTCCACCAGCTCCGGCGACATTACCACTGTCAGCAATAGCTCCGGCGAGATTCCTGCAGTTGTAGAGTCCGAAGCAACTCTGGCGGTTCGGTTGATTCGATCTTTCCCGTCCATTGATATAGATGGCGAAACGACGCCTGTGGCGAGAACTGCAGCGAGGACAAAGTGCGTTGGGAGAAACAACAAGGATGTGAGTTGGGGTTTTACTTCGGTGATCGGAAGACGGAGTGAGATGGAGGACGCAGTTGCTGTCGGACCGCGGTTCTTGTCCCGCACGTGCGATGACGTCGGTGGTTGTACGGCTTCCGGTTCAAAATCCTCTGATGAGATCTCACCCGTTCATTTCTTTGGCGTGTACGATGGCCACGGTGGCTCGCAGGTGGCTGAATTTTGTGCGAAGCGGATGCATGAAATTATAGCGGAGGAGTGGGATAGAGCAATAGGAGATGGCAATGAATGGCAGCGAAGGTGGGAAGCTGTGTTGGGCAGTGGGTTTGAGAGAACTGACAATGAGATCCTAACACAGGCAGTGGCACAGGAAATGGTAGGATCTACTGCTGCTGTGGTTGTTGTATCTCGTTGCCAAATTATAACATCTAATTGTGGTGATTCAAGGGCAGTCCTTTGCCGAGGGACCCAAACGATTCCCTTAACAGTGGATCAGAAGCCTGATAGACCAGATGAACTGTTGAGAATTGAAGAAGCAGGAGGAAAAGTCATAAACTGGAACGGAGCTAGAGTGTGTGGAGTTCTCGCCATGTCCAGGGCCATAGGTGATGGGTACTTGAGGCCATGGATTATTCCGGTGCCTGAGATAACTTTTACAACAAGAAGTGAAGAAGATGAGTGCCTGATCTTGGCCAGCGATGGACTCTGGGATGTTATGACGAATGAAGAGGTTGGAGAAGTTGCGCGCCATATTCTAAGAAGGCTTCGCAGAATGGATGAAGTTTCCATTGCACAGATTGCTGCAGATAGGCTCAGAGATATAGCCTTTGGTAGAAATAGTAAAGACAACATTTCTATCGTAGTTGTTGATCTGAAACCCAAGAGGAAAAAGCGTCAGCAAAGGCCTCCTTCAACTTCCTA 1217 0.5062 MEPTDDDDDRQLRRLDSVPSTDSMSTSSGSTLSSVLSSEDFRRSTSSGDITTVSNSSGEIPAVVESEATLAVRLIRSFPSIDIDGETTPVARTAARTKCVGRNNKDVSWGFTSVIGRRSEMEDAVAVGPRFLSRTCDDVGGCTASGSKSSDEISPVHFFGVYDGHGGSQVAEFCAKRMHEIIAEEWDRAIGDGNEWQRRWEAVLGSGFERTDNEILTQAVAQEMVGSTAAVVVVSRCQIITSNCGDSRAVLCRGTQTIPLTVDQKPDRPDELLRIEEAGGKVINWNGARVCGVLAMSRAIGDGYLRPWIIPVPEITFTTRSEEDECLILASDGLWDVMTNEEVGEVARHILRRLRRMDEVSIAQIAADRLRDIAFGRNSKDNISIVVVDLKPKRKKRQQRPPSTS 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00707 405 CDD PP2Cc 110 390 IPR001932 -
Bva04g00707 405 Gene3D - 95 400 IPR036457 -
Bva04g00707 405 PANTHER ALPHABET, ISOFORM E-RELATED 72 399 - -
Bva04g00707 405 MobiDBLite consensus disorder prediction 17 57 - -
Bva04g00707 405 MobiDBLite consensus disorder prediction 1 57 - -
Bva04g00707 405 SUPERFAMILY PP2C-like 101 392 IPR036457 -
Bva04g00707 405 SMART PP2C_4 97 388 IPR001932 -
Bva04g00707 405 Pfam Protein phosphatase 2C 134 383 IPR001932 -
Bva04g00707 405 MobiDBLite consensus disorder prediction 1 16 - -
Bva04g00707 405 ProSiteProfiles PPM-type phosphatase domain profile. 108 390 IPR001932 -
Bva04g00707 405 ProSitePatterns PPM-type phosphatase domain signature. 158 166 IPR000222 GO:0043169
Bva04g00707 405 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 72 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00707 Bva-Chr4 4660899 4664278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00707 82 399 PP2C-type Phosphatase Gene Family AT4G26080 50.000 5.01e-101 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00707 K14497 - gmx:100793293 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00707 04 4660899 4664278 Bva04g00707 04 4660899 4664278 ECH